CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37313	Canola	plastid	92.88	95.8
CDY50076	Canola	plastid	81.68	82.1
CDY32407	Canola	plastid	78.12	80.79
CDY11726	Canola	cytosol	29.77	80.69
CDY19583	Canola	plastid	80.92	80.3
CDX82215	Canola	plastid	77.86	80.1
AT3G21140.1	Thale cress	plastid	73.54	74.68
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	25.19	72.79
CDY43915	Canola	plastid	71.5	71.5
CDX87825	Canola	plastid	70.48	70.3
VIT_09s0054g00600.t01	Wine grape	plastid	66.16	65.66
KRH47293	Soybean	nucleus	63.61	65.62
TraesCS7B01G150400.1	Wheat	plastid	57.51	63.31
TraesCS7A01G254200.1	Wheat	nucleus, plastid	57.51	63.31
KRH44611	Soybean	nucleus	62.09	63.21
TraesCS7D01G252700.2	Wheat	plastid	57.25	63.03
Os08t0517500-01	Rice	plastid	59.29	62.8
Solyc06g063290.2.1	Tomato	plastid	63.61	61.73
PGSC0003DMT400068174	Potato	plastid	63.1	61.23
GSMUA_Achr7P19630_001	Banana	plastid	59.8	58.46
HORVU7Hr1G052520.1	Barley	plastid	56.49	55.92
Os02t0148400-01	Rice	plastid	55.47	55.33
GSMUA_AchrUn_...	Banana	plastid	55.47	54.36
Zm00001d037710_P001	Maize	cytosol	17.3	53.54
GSMUA_Achr7P04940_001	Banana	plastid	50.89	50.89
KXG25583	Sorghum	cytosol, mitochondrion	12.98	48.57
CDY50859	Canola	plastid	19.59	23.99
CDY64899	Canola	plastid	19.34	23.6

Protein Annotations

EnsemblPlants:CDY27539	EnsemblPlantsGene:GSBRNA2T00038223001	Gene3D:2.30.110.10	Gene3D:3.20.180.10	GO:A0A078GQT7	GO:GO:0003674
GO:GO:0005488	GO:GO:0048037	InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	InterPro:Split_barrel_FMN-bd
PANTHER:PTHR13343	PANTHER:PTHR13343:SF16	PFAM:PF13883	ProteinID:CDY27539	ProteinID:CDY27539.1	SEG:seg
SUPFAM:SSF50475	UniParc:UPI0004EEDC2E	UniPathway:UPA00647	UniProt:A0A078GQT7	MapMan:35.2	:

Description

BnaC01g32220DBnaC01g32220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQT7]

Coordinates

chrLK032206:+:79277..81921

Molecular Weight (calculated)

43219.3 Da

IEP (calculated)

6.557

GRAVY (calculated)

-0.254

Length

393 amino acids

Sequence
(BLAST)

001: MSMEALSTSS HISNLPQVKP LLKSSLPSSQ SSCWLCNPRI PNLRISDGSS HVGLRIQALS HNDDAPSDEG DAAESSGLGL FPGDIFSLSQ EKIETLLSHT
101: SVMIYVQTSL ALPQGCAGNS GGNRAGLYRT PISGGVQNAT SAHALPPPAL AVRNLLEQAR FAHLCTVMSK MHHRREGYPF GSLVDFAPDR MGHPIFLFSP
201: LAIHTRNLLA EPRCSLVVQI PGWSGLSNAR VTLFGDVYPL SQDEQEWAHK QYSAKHHHGP SEQWGNFHYF RMHNISDIYF IGGFGTVAWV DVKEYEALQP
301: DKIAVDGGEQ NLKELNAIFS KPLRELLSTE SEVDDAALIS IDSKGIDVRV RQGAQFNIQR LAFEEGHGVE TLEEAKAALW KVMEKVKLNY LQK

Best Arabidopsis Sequence Match ( AT1G51560.1 )
(BLAST)

001: MDAAIFTSVY VCNIPKTKKA FFNPNPPALS SSSCWLCNSQ AKQIIKLRIR EGSNQGLLRV HALFNNEEAS SESEDKNGFG LLPADIFSLP QEKFGSNVSG
101: EKDSENIIDV ETSLAVPHGG GTRAGLFRTP ISGGVQSATS AHGLPRPALA VRNLMEQARF AHLCTVMSKM HHRREGYPFG SLVDFAPDPM GHPIFSFSPL
201: AIHTRNILAE PRCTLVVQIP GWSCLSNARV TLFGDVYPLP EEQQEWAHKQ YMLKHHQGPS QQWGNFHYFR MQNISDIYFI GGFGTVAWIN VNEYETLQPD
301: KIAVDGGEQN LKELNAIFSK PLRELLSSEA ELDDAAIISI DSKGIDIRVR QGAQFKIQRL AFEESHGVET LEEAKSALWK VIEKGKLHNL QK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8K8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.