Factsheet for Os02t0148400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0654700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51560.1	Os04t0654700-02	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11726	Canola	cytosol	23.86	64.83
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	22.08	63.97
Os08t0517500-01	Rice	plastid	60.15	63.88
Zm00001d015274_P001	Maize	plastid	64.21	63.73
KRH47293	Soybean	nucleus	57.87	59.84
EES04519	Sorghum	plastid	63.71	59.62
KRH44611	Soybean	nucleus	58.38	59.59
GSMUA_Achr7P19630_001	Banana	plastid	60.66	59.45
VIT_09s0054g00600.t01	Wine grape	plastid	57.87	57.58
CDY37313	Canola	plastid	54.31	56.17
Bra023902.1-P	Field mustard	plastid	55.08	55.64
Solyc06g063290.2.1	Tomato	plastid	57.11	55.56
CDY27539	Canola	plastid	55.33	55.47
PGSC0003DMT400068174	Potato	plastid	56.85	55.31
AT3G21140.1	Thale cress	plastid	53.81	54.78
CDY50076	Canola	plastid	54.31	54.73
CDY43915	Canola	plastid	54.31	54.45
CDX82215	Canola	plastid	52.79	54.45
Bra001814.1-P	Field mustard	plastid	52.79	54.45
Bra030435.1-P	Field mustard	plastid	54.06	54.2
Bra031254.1-P	Field mustard	plastid	54.31	54.18
AT1G51560.1	Thale cress	plastid	53.81	54.08
CDY32407	Canola	plastid	52.03	53.95
CDX87825	Canola	plastid	53.81	53.81
CDY19583	Canola	plastid	54.06	53.79
Os07t0573800-02	Rice	plastid	18.02	20.76

Protein Annotations

Gene3D:2.30.110.10	Gene3D:3.20.180.10	MapMan:35.2	EntrezGene:4328299	EMBL:AK072039	ProteinID:BAD13060.1
ProteinID:BAF07805.1	ProteinID:BAS76984.1	ProteinID:BAS76985.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0048037
InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	EnsemblPlantsGene:Os02g0148400	EnsemblPlants:Os02t0148400-01	PFAM:PF13883
PANTHER:PTHR13343	PANTHER:PTHR13343:SF20	UniProt:Q6Z434	SUPFAM:SSF50475	InterPro:Split_barrel_FMN-bd	UniParc:UPI000035040C
RefSeq:XP_015624722.1	SEG:seg	:	:	:	:

Description

FMN-binding split barrel domain containing protein. (Os02t0148400-01);Similar to pyridoxamine 5-phosphate oxidase family protein. (Os02t0148400-02)

Coordinates

chr2:+:2659672..2663043

Molecular Weight (calculated)

43162.1 Da

IEP (calculated)

8.345

GRAVY (calculated)

-0.356

Length

394 amino acids

Sequence
(BLAST)

001: MEPLVRSPVT SPPAIAGAAS PSPSRSLSRR RAPPDAAAFP KPWVIPSSSV KSAACLQLQQ ARAPRRCARL LASAAEGGRR GEEGSPASSS DADDQAEALP
101: FLESDSHHTQ TSKHGESGGS NSGGSRAGLF RTPISGGVHT ATSVHDLPPP ARAVRNLMEQ ARFAHLCTVM SRMHHRRAGY PFGSLVDFAP DPMGHPIFSL
201: SPLAIHTRNL LEDPRCTVVV QVPGWSGLSN ARVTIFGDVV PLPADLQEWA HQQYVLKHQQ WASHQWGNFY YYKMQTISDI YFIGGFGTVA WLDVKEYEAL
301: KPDKIATDGG EQSLKELNAM YSKPLKELLS TEIEVDDAAL ISIDSKGIDI RVRQGAQFNI QRIAFELHYS VETLEEAKEA IRRILGKSRW HAKF

Best Arabidopsis Sequence Match ( AT1G51560.1 )
(BLAST)

001: MDAAIFTSVY VCNIPKTKKA FFNPNPPALS SSSCWLCNSQ AKQIIKLRIR EGSNQGLLRV HALFNNEEAS SESEDKNGFG LLPADIFSLP QEKFGSNVSG
101: EKDSENIIDV ETSLAVPHGG GTRAGLFRTP ISGGVQSATS AHGLPRPALA VRNLMEQARF AHLCTVMSKM HHRREGYPFG SLVDFAPDPM GHPIFSFSPL
201: AIHTRNILAE PRCTLVVQIP GWSCLSNARV TLFGDVYPLP EEQQEWAHKQ YMLKHHQGPS QQWGNFHYFR MQNISDIYFI GGFGTVAWIN VNEYETLQPD
301: KIAVDGGEQN LKELNAIFSK PLRELLSSEA ELDDAAIISI DSKGIDIRVR QGAQFKIQRL AFEESHGVET LEEAKSALWK VIEKGKLHNL QK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8K8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.