Factsheet for Bra031254.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19583	Canola	plastid	96.71	96.46
Bra001814.1-P	Field mustard	plastid	77.97	80.63
Bra023902.1-P	Field mustard	plastid	78.48	79.49
AT3G21140.1	Thale cress	plastid	75.19	76.74
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	24.3	70.59
Bra030435.1-P	Field mustard	plastid	67.85	68.19
VIT_09s0054g00600.t01	Wine grape	plastid	66.58	66.41
KRH47293	Soybean	nucleus	63.54	65.88
TraesCS7A01G254200.1	Wheat	nucleus, plastid	57.72	63.87
TraesCS7B01G150400.1	Wheat	plastid	57.72	63.87
TraesCS7D01G252700.2	Wheat	plastid	57.47	63.59
KRH44611	Soybean	nucleus	61.77	63.21
Os08t0517500-01	Rice	plastid	58.73	62.53
Solyc06g063290.2.1	Tomato	plastid	64.05	62.47
PGSC0003DMT400068174	Potato	plastid	63.29	61.73
GSMUA_Achr7P19630_001	Banana	plastid	59.75	58.71
HORVU7Hr1G052520.1	Barley	plastid	57.72	57.43
GSMUA_AchrUn_...	Banana	plastid	55.19	54.36
Os02t0148400-01	Rice	plastid	54.18	54.31
Zm00001d037710_P001	Maize	cytosol	16.71	51.97
GSMUA_Achr7P04940_001	Banana	plastid	49.87	50.13
KXG25583	Sorghum	cytosol, mitochondrion	11.39	42.86
Bra031966.1-P	Field mustard	plastid	18.99	23.36

Protein Annotations

Gene3D:2.30.110.10	Gene3D:3.20.180.10	MapMan:35.2	EnsemblPlantsGene:Bra031254	EnsemblPlants:Bra031254.1	EnsemblPlants:Bra031254.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0048037	InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119
UniProt:M4ER31	PFAM:PF13883	PANTHER:PTHR13343	PANTHER:PTHR13343:SF16	SUPFAM:SSF50475	InterPro:Split_barrel_FMN-bd
UniParc:UPI000254791B	SEG:seg	:	:	:	:

Description

AT3G21140 (E=1e-182) | FMN binding

Coordinates

chrA05:+:16631210..16633643

Molecular Weight (calculated)

43774.0 Da

IEP (calculated)

6.763

GRAVY (calculated)

-0.301

Length

395 amino acids

Sequence
(BLAST)

001: MEALSTSSSY ISNPLPKTKH LFKPSLLPLV ASSQSSCWLC NSPPKLRIPK LRIRDGSSHG LRIHSLLHNE GEGEDNLGES NGFGFFPGDI FSLSQEKLES
101: ETSHSVIDVE SSLALPQGAG NSGGNRGGLF RTPISGGVQN ATSAHALPRP ALAVRNLLEQ ARFAHLCTVM SKMHHRREGY PFGSLVDFAP DRMGHPIFLF
201: SPLAIHTRNL LAEPRCSLVV QIPGWSGLSN ARVTLFGDVY PLSEDEQEWA HKQYIAKHPH GLSEQWGNFH YFRMQNISDI YFIGGFGTVA WVDVKEYEAL
301: QPDKIAVDGG EHNLKELNAI FSKPLRELLS SETEVDDAAL ISIDSKGIDV RVRQGAQFNI QRLPFEEGHG VETLEEAKAA LWKVIEKVKL NYFQK

Best Arabidopsis Sequence Match ( AT3G21140.1 )
(BLAST)

001: MEALFTSTHT PNLQTKPLLK SPLPTSSQSS CWFCNSLPKT QFPKLRLSNG SSHGLRIQAL LRNETPSEGE DNNGFGFFPG DIFSLSQEKL GSNSNGETSH
101: SVIDVEASLA HPQGGGGNRA GLFRTPISGG VQNATSAHAL PRPALAVRNL LEQARFAHLC TVMSKMHHRR EGYPFGSLVD FAPDRMGHPI FLFSPLAIHT
201: RNLLNEPRCS LVVQIPGWSG LSNARVTLFG DVYPLSEDEQ EWAHKQYIAK HPHGPSEQWG NFHYFRMQNI SDIYFIGGFG TVAWVDVKEY EGLQPDKIAV
301: DGGERNLKEL NAIFSKPLRE LLSTESEVDD AALISIDSKG IDVRVRQGAQ FNIQRLAFEE GHGVETLEEA KSALWKVLEK VKLNLQK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L637]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.