Factsheet for Bra001814.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
extracellular 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82215	Canola	plastid	96.34	96.34
Bra031254.1-P	Field mustard	plastid	80.63	77.97
AT3G21140.1	Thale cress	plastid	78.53	77.52
Bra023902.1-P	Field mustard	plastid	76.96	75.38
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	25.39	71.32
Bra030435.1-P	Field mustard	plastid	70.94	68.96
VIT_09s0054g00600.t01	Wine grape	plastid	67.02	64.65
KRH47293	Soybean	nucleus	63.87	64.04
KRH44611	Soybean	nucleus	62.83	62.18
TraesCS7A01G254200.1	Wheat	nucleus, plastid	57.85	61.9
TraesCS7B01G150400.1	Wheat	plastid	57.85	61.9
TraesCS7D01G252700.2	Wheat	plastid	57.85	61.9
Os08t0517500-01	Rice	plastid	59.69	61.46
Solyc06g063290.2.1	Tomato	plastid	64.4	60.74
PGSC0003DMT400068174	Potato	plastid	63.61	60.0
GSMUA_Achr7P19630_001	Banana	plastid	59.42	56.47
HORVU7Hr1G052520.1	Barley	plastid	58.12	55.92
GSMUA_AchrUn_...	Banana	plastid	56.81	54.11
Os02t0148400-01	Rice	plastid	54.45	52.79
GSMUA_Achr7P04940_001	Banana	plastid	52.88	51.4
Zm00001d037710_P001	Maize	cytosol	17.02	51.18
KXG25583	Sorghum	cytosol, mitochondrion	11.26	40.95
Bra031966.1-P	Field mustard	plastid	19.9	23.68

Protein Annotations

EnsemblPlants:Bra001814.1	EnsemblPlants:Bra001814.1-P	EnsemblPlantsGene:Bra001814	Gene3D:2.30.110.10	Gene3D:3.20.180.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0048037	InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	InterPro:Split_barrel_FMN-bd
PANTHER:PTHR13343	PANTHER:PTHR13343:SF16	PFAM:PF13883	SEG:seg	SUPFAM:SSF50475	UniParc:UPI0002540630
UniProt:M4CC84	MapMan:35.2	:	:	:	:

Description

AT3G21140 (E=2e-167) | FMN binding

Coordinates

chrA03:-:18612482..18614463

Molecular Weight (calculated)

42284.3 Da

IEP (calculated)

7.030

GRAVY (calculated)

-0.284

Length

382 amino acids

Sequence
(BLAST)

001: MEALSTSAYI SNLPVTKPVF KSSLASSQSS CWLCSSPAKR IPKLRTRDGS SHGLRIQALL HNETPSEGGD NLGKSSEFNF FPGDIFSLSQ EKLESVIDVE
101: TSLAHPQGAG GNRAGLFRTP ISGGVQNATS AHALPRPALA VRNLLEQARF AHLCTMMSKM HHRREGYPFG SLVDFAPDRL GHPIFLLSPL AIHTRNLLAE
201: PRCSLVVQMP GWSCLSNARV TLFGDVYPLS DDEQEWAHKQ YIAKHQHGTS EQCGNFRYFR MHNISDIYFI GGFGTVAWVD VKEYEALQPD KIAVDGGEQN
301: LKELNAIFSK PLRELLSSET EVDDAALISI DSKGIDVRVR QGAQFNIQRL PFEEGHGVET LEEAKAALWK VIEKVKLNYL PK

Best Arabidopsis Sequence Match ( AT3G21140.1 )
(BLAST)

001: MEALFTSTHT PNLQTKPLLK SPLPTSSQSS CWFCNSLPKT QFPKLRLSNG SSHGLRIQAL LRNETPSEGE DNNGFGFFPG DIFSLSQEKL GSNSNGETSH
101: SVIDVEASLA HPQGGGGNRA GLFRTPISGG VQNATSAHAL PRPALAVRNL LEQARFAHLC TVMSKMHHRR EGYPFGSLVD FAPDRMGHPI FLFSPLAIHT
201: RNLLNEPRCS LVVQIPGWSG LSNARVTLFG DVYPLSEDEQ EWAHKQYIAK HPHGPSEQWG NFHYFRMQNI SDIYFIGGFG TVAWVDVKEY EGLQPDKIAV
301: DGGERNLKEL NAIFSKPLRE LLSTESEVDD AALISIDSKG IDVRVRQGAQ FNIQRLAFEE GHGVETLEEA KSALWKVLEK VKLNLQK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L637]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.