Factsheet for Bra023902.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37313	Canola	plastid	96.41	98.69
Bra031254.1-P	Field mustard	plastid	79.49	78.48
Bra001814.1-P	Field mustard	plastid	75.38	76.96
AT3G21140.1	Thale cress	plastid	72.31	72.87
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	25.38	72.79
Bra030435.1-P	Field mustard	plastid	69.74	69.21
VIT_09s0054g00600.t01	Wine grape	plastid	66.15	65.15
KRH47293	Soybean	nucleus	63.08	64.57
KRH44611	Soybean	nucleus	62.56	63.21
Os08t0517500-01	Rice	plastid	60.0	63.07
TraesCS7A01G254200.1	Wheat	nucleus, plastid	57.69	63.03
TraesCS7B01G150400.1	Wheat	plastid	57.69	63.03
TraesCS7D01G252700.2	Wheat	plastid	57.44	62.75
Solyc06g063290.2.1	Tomato	plastid	63.33	60.99
PGSC0003DMT400068174	Potato	plastid	62.82	60.49
GSMUA_Achr7P19630_001	Banana	plastid	59.74	57.96
HORVU7Hr1G052520.1	Barley	plastid	56.92	55.92
Os02t0148400-01	Rice	plastid	55.64	55.08
GSMUA_AchrUn_...	Banana	plastid	55.64	54.11
Zm00001d037710_P001	Maize	cytosol	17.18	52.76
GSMUA_Achr7P04940_001	Banana	plastid	50.77	50.38
KXG25583	Sorghum	cytosol, mitochondrion	13.08	48.57
Bra031966.1-P	Field mustard	plastid	19.23	23.36

Protein Annotations

EnsemblPlants:Bra023902.1	EnsemblPlants:Bra023902.1-P	EnsemblPlantsGene:Bra023902	Gene3D:2.30.110.10	Gene3D:3.20.180.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0048037	InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	InterPro:Split_barrel_FMN-bd
PANTHER:PTHR13343	PANTHER:PTHR13343:SF16	PFAM:PF13883	SUPFAM:SSF50475	UniParc:UPI0002544712	UniProt:M4E548
MapMan:35.2	:	:	:	:	:

Description

AT3G21140 (E=4e-174) | FMN binding

Coordinates

chrA01:+:20922085..20924067

Molecular Weight (calculated)

42884.8 Da

IEP (calculated)

6.460

GRAVY (calculated)

-0.287

Length

390 amino acids

Sequence
(BLAST)

001: MSMEALSTSS HISNLPQIKP LLKSSRPSSQ SPCWLCNPRI PNLRISDGSS HVGLRIQALS HNNDTPSDEG DAAESSGLGD IFSLSQEKIE TLLSHSSVMI
101: DVQTSLALPQ GCAGGNSGGN RAGLYRTPIS GGVQNATSAH ALPPPALAVR NLLEQARFAH LCTVMSKMHH RREGYPFGSL VDFASDRMGH PIFLFSPLAI
201: HTRNLLAEPR CSLVVQIPGW SGLSNARVTL FGDVYPLSED EQEWAHKQYS AKHHHGPSEQ WGNFHYFRMH NISDIYFIGG FGTVAWVDVK EYEALQPDKI
301: AVDGGEQNLK ELNAIFSKPL RELLSIESEV DDAALISIDS KGIDVRVRQG AQFNIQRLAF EEGHGVETLE EAKAALWKVM ENVKLNYLQK

Best Arabidopsis Sequence Match ( AT3G21140.1 )
(BLAST)

001: MEALFTSTHT PNLQTKPLLK SPLPTSSQSS CWFCNSLPKT QFPKLRLSNG SSHGLRIQAL LRNETPSEGE DNNGFGFFPG DIFSLSQEKL GSNSNGETSH
101: SVIDVEASLA HPQGGGGNRA GLFRTPISGG VQNATSAHAL PRPALAVRNL LEQARFAHLC TVMSKMHHRR EGYPFGSLVD FAPDRMGHPI FLFSPLAIHT
201: RNLLNEPRCS LVVQIPGWSG LSNARVTLFG DVYPLSEDEQ EWAHKQYIAK HPHGPSEQWG NFHYFRMQNI SDIYFIGGFG TVAWVDVKEY EGLQPDKIAV
301: DGGERNLKEL NAIFSKPLRE LLSTESEVDD AALISIDSKG IDVRVRQGAQ FNIQRLAFEE GHGVETLEEA KSALWKVLEK VKLNLQK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L637]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.