Factsheet for Bra031966.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50859	Canola	plastid	94.39	94.39
CDY64899	Canola	plastid	93.77	93.48
AT3G03890.1	Thale cress	plastid	83.49	83.49
VIT_08s0007g07350.t01	Wine grape	cytosol	63.24	73.55
HORVU2Hr1G037680.2	Barley	cytosol	53.58	65.9
KRG94835	Soybean	mitochondrion	63.86	62.88
KRH06700	Soybean	mitochondrion	63.24	62.27
GSMUA_Achr5P14810_001	Banana	plastid	62.93	60.66
PGSC0003DMT400083485	Potato	mitochondrion, plastid	60.12	60.12
Solyc03g063240.2.1	Tomato	plastid	59.5	59.5
EER99589	Sorghum	plastid	57.32	53.8
Os07t0573800-02	Rice	plastid	57.32	53.8
TraesCS2A01G184900.1	Wheat	unclear	55.45	52.2
TraesCS2B01G222400.2	Wheat	plastid	55.45	51.9
TraesCS2D01G202700.1	Wheat	plastid	54.83	51.31
Zm00001d021881_P001	Maize	plastid	45.48	51.23
Bra001814.1-P	Field mustard	plastid	23.68	19.9
Bra023902.1-P	Field mustard	plastid	23.36	19.23
Bra031254.1-P	Field mustard	plastid	23.36	18.99
Bra030435.1-P	Field mustard	plastid	20.87	17.05

Protein Annotations

KEGG:00750+1.4.3.5	Gene3D:2.30.110.10	Gene3D:3.20.180.10	MapMan:35.2	EnsemblPlantsGene:Bra031966	EnsemblPlants:Bra031966.1
EnsemblPlants:Bra031966.1-P	InterPro:DUF2470	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0048037	InterPro:Haem_oxidase_HugZ-like_sf
InterPro:IPR012349	InterPro:IPR037119	UniProt:M4ET36	PFAM:PF01243	PFAM:PF10615	PANTHER:PTHR13343
PANTHER:PTHR13343:SF4	InterPro:Pyridox_Oxase_put	SUPFAM:SSF50475	InterPro:Split_barrel_FMN-bd	UniParc:UPI0002546517	SEG:seg

Description

AT3G03890 (E=1e-148) | FMN binding

Coordinates

chrA02:-:26885756..26887951

Molecular Weight (calculated)

34865.7 Da

IEP (calculated)

8.619

GRAVY (calculated)

-0.063

Length

321 amino acids

Sequence
(BLAST)

001: MKSVVAHFST PLITGARFFS PTCLIHPKSI STVRRRKFSS SFTVMASAAQ SSSQAVSPGS AETDVFKLIQ AHEAKAARLS PVEEIRTVLN GSVCGMLSTF
101: SQKYEGYPSG SMVDFACDAD GSPILAVSSL AVHTKDLLAN PKCSLLVARD PEDRTGLRIT LHGDAVLVSD KDQAAVRSAY LAKHPNAFWV DFGDFSFMRI
201: EPKVVRYVSG VATAFLGSGE FNKEEYQAAK VDPIAQFAKP VTSHMNKDHE EDTIAIVHHA TSIPVESALM LDLDSLGFNV KATLQGNTFK LRVPFPRRAQ
301: DRKDVKTLIV EMLQAAKSVS N

Best Arabidopsis Sequence Match ( AT3G03890.1 )
(BLAST)

001: MKSLVAHFST PLITARLVPR CIIHRASISA VSFSTVRRRF SPLTMASAAQ SSSQAVSYGS GNSDTDVFKL IQAHEEKAAR LSPVEEIRTV LNGSICGMLS
101: TFSQKYEGYP SGSMVDFACD ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS AYLAKHPKAF WVDFGDFSFM
201: RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR
301: AQDRKDVKTL IVEMLQAAKS N

Arabidopsis Description

AT3G03890 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDU1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.