Factsheet for GSMUA_Achr5P14810_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G037680.2	Barley	cytosol	58.86	75.1
VIT_08s0007g07350.t01	Wine grape	cytosol	55.56	67.03
EER99589	Sorghum	plastid	65.77	64.04
CDY50859	Canola	plastid	60.96	63.24
AT3G03890.1	Thale cress	plastid	60.96	63.24
Bra031966.1-P	Field mustard	plastid	60.66	62.93
Os07t0573800-02	Rice	plastid	64.26	62.57
KRG94835	Soybean	mitochondrion	60.36	61.66
TraesCS2A01G184900.1	Wheat	unclear	62.76	61.29
TraesCS2D01G202700.1	Wheat	plastid	63.06	61.22
CDY64899	Canola	plastid	59.16	61.18
KRH06700	Soybean	mitochondrion	59.76	61.04
TraesCS2B01G222400.2	Wheat	plastid	62.76	60.93
Zm00001d021881_P001	Maize	plastid	51.05	59.65
PGSC0003DMT400083485	Potato	mitochondrion, plastid	56.16	58.26
Solyc03g063240.2.1	Tomato	plastid	55.26	57.32
GSMUA_AchrUn_...	Banana	plastid	22.52	18.7
GSMUA_Achr7P04940_001	Banana	plastid	21.32	18.07
GSMUA_Achr7P19630_001	Banana	plastid	20.72	17.16

Protein Annotations

KEGG:00750+1.4.3.5	Gene3D:2.30.110.10	Gene3D:3.20.180.10	MapMan:35.2	InterPro:DUF2470	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507
GO:GO:0009536	GO:GO:0048037	EnsemblPlantsGene:GSMUA_Achr5G14810_001	EnsemblPlants:GSMUA_Achr5P14810_001	EnsemblPlants:GSMUA_Achr5T14810_001	InterPro:Haem_oxidase_HugZ-like_sf
InterPro:IPR012349	InterPro:IPR037119	UniProt:M0SYL0	PFAM:PF01243	PFAM:PF10615	PANTHER:PTHR13343
PANTHER:PTHR13343:SF4	InterPro:Pyridox_Oxase_put	SUPFAM:SSF50475	InterPro:Split_barrel_FMN-bd	UniParc:UPI000296F2E5	SEG:seg

Description

Putative uncharacterized protein Sb02g037160 [Source:GMGC_GENE;Acc:GSMUA_Achr5G14810_001]

Coordinates

chr5:-:10718341..10725380

Molecular Weight (calculated)

36421.2 Da

IEP (calculated)

8.257

GRAVY (calculated)

-0.261

Length

333 amino acids

Sequence
(BLAST)

001: MTTVLRTPPV RLPSFVSPFV NRLPFTKPLS HSAKLSSPSR RRLFAAFSPR AMASSASPSS SQMAAPGDVT GVSDAFEKIR AHQEAAARLS PVEEIRTLLD
101: LSTRGMLSTF SQVHEGYPSG SMVDFACDHD GSPILAVSSL AVHSKNLLAN PKCSLLVAKD PEDRTDIVVT IYGDAVPVSE DDNEAARAAY LRRHPDAFWV
201: DFGDFSFIHI KPKYVRYVSG VATALLGSGE FDGEEYKAAK VDPISQFTKP ITSHMNRDHQ EDTKAIVQHS TSVKVDFAHM QDVDSLGFNV KAGYQGSTLK
301: LRIPFPRRAQ DRKDVKTLIV EMLQAAKSNE GLS

Best Arabidopsis Sequence Match ( AT3G03890.1 )
(BLAST)

001: MKSLVAHFST PLITARLVPR CIIHRASISA VSFSTVRRRF SPLTMASAAQ SSSQAVSYGS GNSDTDVFKL IQAHEEKAAR LSPVEEIRTV LNGSICGMLS
101: TFSQKYEGYP SGSMVDFACD ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS AYLAKHPKAF WVDFGDFSFM
201: RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR
301: AQDRKDVKTL IVEMLQAAKS N

Arabidopsis Description

AT3G03890 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDU1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.