Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G184900.1 | Wheat | unclear | 98.85 | 75.66 |
| TraesCS2D01G202700.1 | Wheat | plastid | 98.08 | 74.64 |
| TraesCS2B01G222400.2 | Wheat | plastid | 98.08 | 74.64 |
| Os07t0573800-02 | Rice | plastid | 91.95 | 70.18 |
| EER99589 | Sorghum | plastid | 87.36 | 66.67 |
| VIT_08s0007g07350.t01 | Wine grape | cytosol | 67.43 | 63.77 |
| Zm00001d021881_P001 | Maize | plastid | 66.28 | 60.7 |
| GSMUA_Achr5P14810_001 | Banana | plastid | 75.1 | 58.86 |
| KRH06700 | Soybean | mitochondrion | 72.03 | 57.67 |
| KRG94835 | Soybean | mitochondrion | 71.26 | 57.06 |
| PGSC0003DMT400083485 | Potato | mitochondrion, plastid | 68.97 | 56.07 |
| Solyc03g063240.2.1 | Tomato | plastid | 68.2 | 55.45 |
| Bra031966.1-P | Field mustard | plastid | 65.9 | 53.58 |
| CDY50859 | Canola | plastid | 65.52 | 53.27 |
| CDY64899 | Canola | plastid | 65.13 | 52.8 |
| AT3G03890.1 | Thale cress | plastid | 64.37 | 52.34 |
| HORVU7Hr1G052520.1 | Barley | plastid | 21.46 | 14.11 |
Protein Annotations
| Gene3D:2.30.110.10 | Gene3D:3.20.180.10 | MapMan:35.2 | UniProt:A0A287HQX9 | InterPro:DUF2470 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0048037 | EnsemblPlantsGene:HORVU2Hr1G037680 | EnsemblPlants:HORVU2Hr1G037680.2 | InterPro:Haem_oxidase_HugZ-like_sf | InterPro:IPR012349 |
| InterPro:IPR037119 | PFAM:PF10615 | PFAM:PF13883 | PANTHER:PTHR13343 | PANTHER:PTHR13343:SF4 | SUPFAM:SSF50475 |
| InterPro:Split_barrel_FMN-bd | UniParc:UPI000B47419E | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:173650534..173657568
Molecular Weight (calculated)
28297.6 Da
IEP (calculated)
6.606
GRAVY (calculated)
-0.151
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: GGSADAFEVI RAHQVKAARL PPVEEIRTIL DQSVRGVLAT HSQEHVGYPS GSMVDFACDQ DGSPILAVSS LAVHSKNLTG STKCSLLVAK DPEDRTDTVI
101: TVYGDAIPVP DEEKDAVRTA YLRRHPEAFW VDFGDFRFLH IKPKAVRYVS GVATAILGSG EFSAAEFKEA KVDPISQFST PIAGHMNKDH ADDTKLIVQH
201: STSVKVDFAS IVDVDSLGIN VKAGYDGTVL KLRIPFPRRA QDRKDVKTLI VEMLQAAKAS S
101: TVYGDAIPVP DEEKDAVRTA YLRRHPEAFW VDFGDFRFLH IKPKAVRYVS GVATAILGSG EFSAAEFKEA KVDPISQFST PIAGHMNKDH ADDTKLIVQH
201: STSVKVDFAS IVDVDSLGIN VKAGYDGTVL KLRIPFPRRA QDRKDVKTLI VEMLQAAKAS S
001: MKSLVAHFST PLITARLVPR CIIHRASISA VSFSTVRRRF SPLTMASAAQ SSSQAVSYGS GNSDTDVFKL IQAHEEKAAR LSPVEEIRTV LNGSICGMLS
101: TFSQKYEGYP SGSMVDFACD ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS AYLAKHPKAF WVDFGDFSFM
201: RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR
301: AQDRKDVKTL IVEMLQAAKS N
101: TFSQKYEGYP SGSMVDFACD ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS AYLAKHPKAF WVDFGDFSFM
201: RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR
301: AQDRKDVKTL IVEMLQAAKS N
Arabidopsis Description
AT3G03890 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDU1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.