Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra031966.1-P | Field mustard | plastid | 93.48 | 93.77 |
CDY50859 | Canola | plastid | 90.68 | 90.97 |
AT3G03890.1 | Thale cress | plastid | 81.37 | 81.62 |
VIT_08s0007g07350.t01 | Wine grape | cytosol | 60.87 | 71.01 |
HORVU2Hr1G037680.2 | Barley | cytosol | 52.8 | 65.13 |
KRG94835 | Soybean | mitochondrion | 63.66 | 62.88 |
KRH06700 | Soybean | mitochondrion | 62.42 | 61.66 |
GSMUA_Achr5P14810_001 | Banana | plastid | 61.18 | 59.16 |
PGSC0003DMT400083485 | Potato | mitochondrion, plastid | 58.7 | 58.88 |
Solyc03g063240.2.1 | Tomato | plastid | 58.07 | 58.26 |
EER99589 | Sorghum | plastid | 56.52 | 53.22 |
Os07t0573800-02 | Rice | plastid | 56.52 | 53.22 |
TraesCS2B01G222400.2 | Wheat | plastid | 55.28 | 51.9 |
TraesCS2A01G184900.1 | Wheat | unclear | 54.35 | 51.32 |
TraesCS2D01G202700.1 | Wheat | plastid | 54.35 | 51.02 |
Zm00001d021881_P001 | Maize | plastid | 44.72 | 50.53 |
CDY11726 | Canola | cytosol | 9.94 | 22.07 |
CDY19583 | Canola | plastid | 24.84 | 20.2 |
CDX82215 | Canola | plastid | 23.91 | 20.16 |
CDY50076 | Canola | plastid | 24.22 | 19.95 |
CDY32407 | Canola | plastid | 23.29 | 19.74 |
CDY37313 | Canola | plastid | 23.29 | 19.68 |
CDY27539 | Canola | plastid | 23.6 | 19.34 |
CDX87825 | Canola | plastid | 22.05 | 18.02 |
CDY43915 | Canola | plastid | 21.74 | 17.81 |
Protein Annotations
KEGG:00750+1.4.3.5 | Gene3D:2.30.110.10 | Gene3D:3.20.180.10 | MapMan:35.2 | GO:A0A078JE00 | UniProt:A0A078JE00 |
EnsemblPlants:CDY64899 | ProteinID:CDY64899 | ProteinID:CDY64899.1 | InterPro:DUF2470 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0048037 | EnsemblPlantsGene:GSBRNA2T00043832001 | InterPro:Haem_oxidase_HugZ-like_sf | InterPro:IPR012349 | InterPro:IPR037119 | PFAM:PF01243 |
PFAM:PF10615 | PANTHER:PTHR13343 | PANTHER:PTHR13343:SF4 | MetaCyc:PWY-7204 | MetaCyc:PWY-7282 | InterPro:Pyridox_Oxase_put |
SUPFAM:SSF50475 | InterPro:Split_barrel_FMN-bd | UniPathway:UPA00647 | UniParc:UPI0004EEE115 | SEG:seg | : |
Description
BnaC05g47660DBnaC05g47660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE00]
Coordinates
chrLK034596:+:9949..12705
Molecular Weight (calculated)
34932.8 Da
IEP (calculated)
8.490
GRAVY (calculated)
-0.050
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSVVAHFST PLITGARFFS PTCLIQRQSI STVRCRKSSS SLTVMASSSA QSSSQAVSPG SAETDVFKMI QAHEAKAARL SRVEEIRTVL NGSVCGMLST
101: FSQKYEGYPS GSMVDFACDA DGSPILAVSS LAVHTKNLLA NPKCSLLVAR DPEDRTGLRI TLHGDAVLVS DNDQAAVRSA YLAKHPNAFW VDFGDFSFMR
201: IEPKVVRFVS GVATAFLGSG EFSKEEYQTA KVDPIAQFAK PVTSHMNKDH EEDTIAIVHH ATSIPVESAL MLDLDSLGFN VKATLQGNTF KIRVPFPRRA
301: QDRKDVKILI VEMLQAAKSV SN
101: FSQKYEGYPS GSMVDFACDA DGSPILAVSS LAVHTKNLLA NPKCSLLVAR DPEDRTGLRI TLHGDAVLVS DNDQAAVRSA YLAKHPNAFW VDFGDFSFMR
201: IEPKVVRFVS GVATAFLGSG EFSKEEYQTA KVDPIAQFAK PVTSHMNKDH EEDTIAIVHH ATSIPVESAL MLDLDSLGFN VKATLQGNTF KIRVPFPRRA
301: QDRKDVKILI VEMLQAAKSV SN
001: MKSLVAHFST PLITARLVPR CIIHRASISA VSFSTVRRRF SPLTMASAAQ SSSQAVSYGS GNSDTDVFKL IQAHEEKAAR LSPVEEIRTV LNGSICGMLS
101: TFSQKYEGYP SGSMVDFACD ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS AYLAKHPKAF WVDFGDFSFM
201: RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR
301: AQDRKDVKTL IVEMLQAAKS N
101: TFSQKYEGYP SGSMVDFACD ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS AYLAKHPKAF WVDFGDFSFM
201: RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR
301: AQDRKDVKTL IVEMLQAAKS N
Arabidopsis Description
AT3G03890 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDU1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.