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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031966.1-P Field mustard plastid 93.48 93.77
CDY50859 Canola plastid 90.68 90.97
AT3G03890.1 Thale cress plastid 81.37 81.62
VIT_08s0007g07350.t01 Wine grape cytosol 60.87 71.01
HORVU2Hr1G037680.2 Barley cytosol 52.8 65.13
KRG94835 Soybean mitochondrion 63.66 62.88
KRH06700 Soybean mitochondrion 62.42 61.66
GSMUA_Achr5P14810_001 Banana plastid 61.18 59.16
PGSC0003DMT400083485 Potato mitochondrion, plastid 58.7 58.88
Solyc03g063240.2.1 Tomato plastid 58.07 58.26
EER99589 Sorghum plastid 56.52 53.22
Os07t0573800-02 Rice plastid 56.52 53.22
TraesCS2B01G222400.2 Wheat plastid 55.28 51.9
TraesCS2A01G184900.1 Wheat unclear 54.35 51.32
TraesCS2D01G202700.1 Wheat plastid 54.35 51.02
Zm00001d021881_P001 Maize plastid 44.72 50.53
CDY11726 Canola cytosol 9.94 22.07
CDY19583 Canola plastid 24.84 20.2
CDX82215 Canola plastid 23.91 20.16
CDY50076 Canola plastid 24.22 19.95
CDY32407 Canola plastid 23.29 19.74
CDY37313 Canola plastid 23.29 19.68
CDY27539 Canola plastid 23.6 19.34
CDX87825 Canola plastid 22.05 18.02
CDY43915 Canola plastid 21.74 17.81
Protein Annotations
KEGG:00750+1.4.3.5Gene3D:2.30.110.10Gene3D:3.20.180.10MapMan:35.2GO:A0A078JE00UniProt:A0A078JE00
EnsemblPlants:CDY64899ProteinID:CDY64899ProteinID:CDY64899.1InterPro:DUF2470GO:GO:0003674GO:GO:0005488
GO:GO:0048037EnsemblPlantsGene:GSBRNA2T00043832001InterPro:Haem_oxidase_HugZ-like_sfInterPro:IPR012349InterPro:IPR037119PFAM:PF01243
PFAM:PF10615PANTHER:PTHR13343PANTHER:PTHR13343:SF4MetaCyc:PWY-7204MetaCyc:PWY-7282InterPro:Pyridox_Oxase_put
SUPFAM:SSF50475InterPro:Split_barrel_FMN-bdUniPathway:UPA00647UniParc:UPI0004EEE115SEG:seg:
Description
BnaC05g47660DBnaC05g47660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE00]
Coordinates
chrLK034596:+:9949..12705
Molecular Weight (calculated)
34932.8 Da
IEP (calculated)
8.490
GRAVY (calculated)
-0.050
Length
322 amino acids
Sequence
(BLAST)
001: MKSVVAHFST PLITGARFFS PTCLIQRQSI STVRCRKSSS SLTVMASSSA QSSSQAVSPG SAETDVFKMI QAHEAKAARL SRVEEIRTVL NGSVCGMLST
101: FSQKYEGYPS GSMVDFACDA DGSPILAVSS LAVHTKNLLA NPKCSLLVAR DPEDRTGLRI TLHGDAVLVS DNDQAAVRSA YLAKHPNAFW VDFGDFSFMR
201: IEPKVVRFVS GVATAFLGSG EFSKEEYQTA KVDPIAQFAK PVTSHMNKDH EEDTIAIVHH ATSIPVESAL MLDLDSLGFN VKATLQGNTF KIRVPFPRRA
301: QDRKDVKILI VEMLQAAKSV SN
Best Arabidopsis Sequence Match ( AT3G03890.1 )
(BLAST)
001: MKSLVAHFST PLITARLVPR CIIHRASISA VSFSTVRRRF SPLTMASAAQ SSSQAVSYGS GNSDTDVFKL IQAHEEKAAR LSPVEEIRTV LNGSICGMLS
101: TFSQKYEGYP SGSMVDFACD ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS AYLAKHPKAF WVDFGDFSFM
201: RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR
301: AQDRKDVKTL IVEMLQAAKS N
Arabidopsis Description
AT3G03890 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDU1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.