CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031254.1-P	Field mustard	plastid	96.46	96.71
CDY50076	Canola	plastid	93.69	94.88
CDY11726	Canola	cytosol	31.06	84.83
CDY32407	Canola	plastid	78.79	82.11
CDY27539	Canola	plastid	80.3	80.92
CDX82215	Canola	plastid	77.53	80.37
CDY37313	Canola	plastid	77.02	80.05
AT3G21140.1	Thale cress	plastid	75.25	77.0
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	24.49	71.32
CDY43915	Canola	plastid	68.18	68.7
CDX87825	Canola	plastid	67.68	68.02
VIT_09s0054g00600.t01	Wine grape	plastid	65.66	65.66
KRH47293	Soybean	nucleus	62.88	65.35
TraesCS7D01G252700.2	Wheat	plastid	57.32	63.59
TraesCS7A01G254200.1	Wheat	nucleus, plastid	57.32	63.59
TraesCS7B01G150400.1	Wheat	plastid	57.32	63.59
KRH44611	Soybean	nucleus	61.11	62.69
Os08t0517500-01	Rice	plastid	58.59	62.53
Solyc06g063290.2.1	Tomato	plastid	63.38	61.98
PGSC0003DMT400068174	Potato	plastid	62.88	61.48
GSMUA_Achr7P19630_001	Banana	plastid	59.6	58.71
HORVU7Hr1G052520.1	Barley	plastid	57.32	57.18
GSMUA_AchrUn_...	Banana	plastid	54.8	54.11
Os02t0148400-01	Rice	plastid	53.79	54.06
Zm00001d037710_P001	Maize	cytosol	16.67	51.97
GSMUA_Achr7P04940_001	Banana	plastid	49.75	50.13
KXG25583	Sorghum	cytosol, mitochondrion	11.11	41.9
CDY64899	Canola	plastid	20.2	24.84
CDY50859	Canola	plastid	19.44	23.99

Protein Annotations

Gene3D:2.30.110.10	Gene3D:3.20.180.10	MapMan:35.2	GO:A0A078G4I3	UniProt:A0A078G4I3	EnsemblPlants:CDY19583
ProteinID:CDY19583	ProteinID:CDY19583.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0048037	EnsemblPlantsGene:GSBRNA2T00009243001
InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	PFAM:PF13883	PANTHER:PTHR13343	PANTHER:PTHR13343:SF16
SUPFAM:SSF50475	InterPro:Split_barrel_FMN-bd	UniPathway:UPA00647	UniParc:UPI0004EDC525	SEG:seg	:

Description

BnaA05g19910DBnaA05g19910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4I3]

Coordinates

chrLK032098:+:191525..194144

Molecular Weight (calculated)

43874.1 Da

IEP (calculated)

6.763

GRAVY (calculated)

-0.306

Length

396 amino acids

Sequence
(BLAST)

001: MEALSTSSSY ISNPLPKTKH LFKPSLLPLV ASSQSSCWLC NSPPKLRIPK LRIRDGSSHG LRIHSLLHNE GEGEDNLGES NGFGFFPGDI FSISQEKVES
101: ETSHSVIDVE SSLALPQGAG NSGGNRGGLF RTPISGGVQN ATSAHALPRP ALAVRNLLEQ ARFAHLCTVM SKMHHRREGY PFGSLVDFAP DRMGHPIFLF
201: SPLAIHTRNL LAEPRCSLVV QQIPGWSGLS NARVTLFGDV YPLSEDEQEW AHKQYIAKHP HGLSEQWGNF HYFRMQNISD IYFIGGFGTV AWVDVKEYEA
301: LQPDKIAVDG GEHNLKELNA IFSKPLRELL SSESEVDDAA LISIDSKGID VRVRQGAQFN IQRLPFEEGH GVETLEEAKA ALWKVIEKVK LNYFQK

Best Arabidopsis Sequence Match ( AT3G21140.1 )
(BLAST)

001: MEALFTSTHT PNLQTKPLLK SPLPTSSQSS CWFCNSLPKT QFPKLRLSNG SSHGLRIQAL LRNETPSEGE DNNGFGFFPG DIFSLSQEKL GSNSNGETSH
101: SVIDVEASLA HPQGGGGNRA GLFRTPISGG VQNATSAHAL PRPALAVRNL LEQARFAHLC TVMSKMHHRR EGYPFGSLVD FAPDRMGHPI FLFSPLAIHT
201: RNLLNEPRCS LVVQIPGWSG LSNARVTLFG DVYPLSEDEQ EWAHKQYIAK HPHGPSEQWG NFHYFRMQNI SDIYFIGGFG TVAWVDVKEY EGLQPDKIAV
301: DGGERNLKEL NAIFSKPLRE LLSTESEVDD AALISIDSKG IDVRVRQGAQ FNIQRLAFEE GHGVETLEEA KSALWKVLEK VKLNLQK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L637]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.