CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001814.1-P	Field mustard	plastid	96.34	96.34
CDY32407	Canola	plastid	93.72	94.21
CDY50076	Canola	plastid	82.72	80.82
CDY11726	Canola	cytosol	30.37	80.0
AT3G21140.1	Thale cress	plastid	80.63	79.59
CDY27539	Canola	plastid	80.1	77.86
CDY19583	Canola	plastid	80.37	77.53
CDY37313	Canola	plastid	76.7	76.9
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	25.39	71.32
CDY43915	Canola	plastid	70.68	68.7
CDX87825	Canola	plastid	70.42	68.27
VIT_09s0054g00600.t01	Wine grape	plastid	67.28	64.9
KRH47293	Soybean	nucleus	63.61	63.78
TraesCS7D01G252700.2	Wheat	plastid	58.64	62.75
TraesCS7A01G254200.1	Wheat	nucleus, plastid	58.64	62.75
TraesCS7B01G150400.1	Wheat	plastid	58.64	62.75
KRH44611	Soybean	nucleus	63.09	62.44
Os08t0517500-01	Rice	plastid	59.95	61.73
Solyc06g063290.2.1	Tomato	plastid	64.14	60.49
PGSC0003DMT400068174	Potato	plastid	63.35	59.75
GSMUA_Achr7P19630_001	Banana	plastid	59.69	56.72
HORVU7Hr1G052520.1	Barley	plastid	58.38	56.17
GSMUA_AchrUn_...	Banana	plastid	56.81	54.11
Os02t0148400-01	Rice	plastid	54.45	52.79
Zm00001d037710_P001	Maize	cytosol	17.02	51.18
GSMUA_Achr7P04940_001	Banana	plastid	52.62	51.15
KXG25583	Sorghum	cytosol, mitochondrion	11.26	40.95
CDY64899	Canola	plastid	20.16	23.91
CDY50859	Canola	plastid	19.9	23.68

Protein Annotations

Gene3D:2.30.110.10	Gene3D:3.20.180.10	MapMan:35.2	GO:A0A078CZE8	EnsemblPlants:CDX82215	ProteinID:CDX82215
ProteinID:CDX82215.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0048037	EnsemblPlantsGene:GSBRNA2T00137308001	InterPro:Haem_oxidase_HugZ-like_sf
InterPro:IPR012349	InterPro:IPR037119	PFAM:PF13883	PANTHER:PTHR13343	PANTHER:PTHR13343:SF16	SUPFAM:SSF50475
InterPro:Split_barrel_FMN-bd	UniPathway:UPA00647	UniParc:UPI0004EE6BB0	SEG:seg	:	:

Description

BnaA03g36060D

Coordinates

chrLK031828:+:41288..43398

Molecular Weight (calculated)

42203.2 Da

IEP (calculated)

7.030

GRAVY (calculated)

-0.302

Length

382 amino acids

Sequence
(BLAST)

001: MEALSTSAYI SSLPETKPLF KSSLASSQSS CWSCSSPAKR IPKLRTRDGS SHGLRIQALL HNETPSEGGD NLGKSSGFNF FPGDIFSLSQ EKLESVIDVE
101: TSLAHPQGAG GNRAGLFRTP ISGGVQNATS AHALPRPALA VRNLLEQARF AHLCTMMSKM HHRREGYPFG SLVDFAPDRL GHPIFLLSPL AIHTRNLLAE
201: PRCSLVVQMP GWSCLSNARV TLFGDVYPLS DDEQEWAHKQ YIAKHQHGTS EQCGNFRYFR MHNISDIYFI GGFGTVAWVD VKEYEALQPD KIAVDGGEQN
301: LKELNAIFSK PLRELLSSET EVDDAALISI DSKGIDVRVR QGAQFNIQRL PFEEGHGVET LEEAKAALWK VIEKVKLNYL PK

Best Arabidopsis Sequence Match ( AT3G21140.1 )
(BLAST)

001: MEALFTSTHT PNLQTKPLLK SPLPTSSQSS CWFCNSLPKT QFPKLRLSNG SSHGLRIQAL LRNETPSEGE DNNGFGFFPG DIFSLSQEKL GSNSNGETSH
101: SVIDVEASLA HPQGGGGNRA GLFRTPISGG VQNATSAHAL PRPALAVRNL LEQARFAHLC TVMSKMHHRR EGYPFGSLVD FAPDRMGHPI FLFSPLAIHT
201: RNLLNEPRCS LVVQIPGWSG LSNARVTLFG DVYPLSEDEQ EWAHKQYIAK HPHGPSEQWG NFHYFRMQNI SDIYFIGGFG TVAWVDVKEY EGLQPDKIAV
301: DGGERNLKEL NAIFSKPLRE LLSTESEVDD AALISIDSKG IDVRVRQGAQ FNIQRLAFEE GHGVETLEEA KSALWKVLEK VKLNLQK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L637]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.