CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19010_001	Banana	cytosol	85.71	20.12
KRG97049	Soybean	cytosol	88.31	20.06
KRH34399	Soybean	cytosol	97.4	13.86
KRH68797	Soybean	cytosol	88.31	12.66
KRH34156	Soybean	cytosol	87.01	12.48
KRG92626	Soybean	cytosol	87.01	12.48
Zm00001d032708_P009	Maize	cytosol	84.42	12.04
GSMUA_Achr11P...	Banana	cytosol	84.42	12.01
EER94083	Sorghum	cytosol	84.42	12.01
GSMUA_AchrUn_...	Banana	cytosol	83.12	11.81
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	81.82	11.65
Zm00001d014037_P004	Maize	cytosol	84.42	11.32
HORVU1Hr1G040980.1	Barley	cytosol	79.22	11.28
TraesCS1B01G171200.1	Wheat	cytosol	79.22	11.28
TraesCS1A01G153900.1	Wheat	cytosol	79.22	11.28
TraesCS1D01G152300.1	Wheat	cytosol	77.92	11.09
KRH02218	Soybean	cytosol	16.88	2.73
KRH50907	Soybean	cytosol	16.88	2.73
KRH62662	Soybean	cytosol	0.0	0.0
VIT_14s0036g00730.t01	Wine grape	extracellular	0.0	0.0
KRG92401	Soybean	cytosol, plastid	0.0	0.0
KRG92392	Soybean	cytosol	0.0	0.0
KRG92395	Soybean	cytosol	0.0	0.0
KRG97048	Soybean	nucleus	0.0	0.0
KRG92399	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02012749	EnsemblPlants:KRG92396	EnsemblPlantsGene:GLYMA_20G2085004	Gene3D:1.10.238.220	InterPro:EF-hand-dom_pair	PANTHER:PTHR14095
PANTHER:PTHR14095:SF7	ProteinID:KRG92396	ProteinID:KRG92396.1	ProteinID:KRG92397.1	SUPFAM:SSF47473	UniParc:UPI0006EE0D96
UniProt:A0A0R0EE28	MapMan:18.4.24.1.2.4	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:44487717..44489370

Molecular Weight (calculated)

9115.9 Da

IEP (calculated)

5.111

GRAVY (calculated)

-0.525

Length

77 amino acids

Sequence
(BLAST)

1: DDFKPVLREL LSTHPGLEFL QTTPEFQERY AETVIHRIFY YMNRSGNGRL TLRELKRGNL IDAILHVDEE EDINKVL

Best Arabidopsis Sequence Match ( AT5G28850.1 )
(BLAST)

001: MKASLYSRFY SFLFFFSWQD DFKPLLKELL ATHPGLEFLQ STPEFQERYA ETVTYRIFYY INRSGNGRIT FRELKRGNLI DAMLHADEEE DINKVLRYFS
101: YEHFYVIYCK FWELDTDHDF LIDKENLMRY GNHALTYRIV DRIFSQVARK FTSKVEGKMG YEDFVYFILA EEDKSSVPSL EYWFKCIDLD ANGIITRNEM
201: QFFYEEQLHR MECMAQEAVL FEDILCQMID MIGPENESHI TLHDLKGSKL SGNVFNILFN LNKFMAFETR DPFLIRQERE NPTLTDWDRF AHREYIRLSM
301: EEDVEDASNG SAEVWDDSSL EAPF

Arabidopsis Description

B''BETASerine/threonine protein phosphatase 2A regulatory subunit B''beta [Source:UniProtKB/Swiss-Prot;Acc:Q5QIT3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.