CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62662	Soybean	cytosol	32.48	71.7
GSMUA_Achr8P19010_001	Banana	cytosol	85.47	30.49
KRG97049	Soybean	cytosol	85.47	29.5
KRH34399	Soybean	cytosol	98.29	21.26
KRH68797	Soybean	cytosol	85.47	18.62
EER94083	Sorghum	cytosol	85.47	18.48
HORVU1Hr1G040980.1	Barley	cytosol	85.47	18.48
TraesCS1D01G152300.1	Wheat	cytosol	85.47	18.48
TraesCS1B01G171200.1	Wheat	cytosol	85.47	18.48
TraesCS1A01G153900.1	Wheat	cytosol	85.47	18.48
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	85.47	18.48
GSMUA_AchrUn_...	Banana	cytosol	85.47	18.45
Zm00001d032708_P009	Maize	cytosol	84.62	18.33
GSMUA_Achr11P...	Banana	cytosol	84.62	18.3
KRH34156	Soybean	cytosol	83.76	18.25
KRG92626	Soybean	cytosol	82.91	18.06
Zm00001d014037_P004	Maize	cytosol	83.76	17.07
KRH50907	Soybean	cytosol	17.95	4.4
KRH02218	Soybean	cytosol	17.09	4.19
KRG97048	Soybean	nucleus	0.0	0.0
KRG92401	Soybean	cytosol, plastid	0.0	0.0
KRG92399	Soybean	cytosol	0.0	0.0
KRG92396	Soybean	cytosol	0.0	0.0
VIT_14s0036g00730.t01	Wine grape	extracellular	0.0	0.0
KRG92395	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02012749	EnsemblPlants:KRG92392	EnsemblPlantsGene:GLYMA_20G2085002	Gene3D:1.10.238.10	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7
ProteinID:KRG92392	ProteinID:KRG92392.1	ProteinID:KRG92393.1	UniParc:UPI0006EE054B	UniProt:A0A0R0EQD4	MapMan:18.4.24.1.2.4

Description

hypothetical protein

Coordinates

chr20:-:44483359..44485027

Molecular Weight (calculated)

13763.2 Da

IEP (calculated)

4.080

GRAVY (calculated)

-0.509

Length

117 amino acids

Sequence
(BLAST)

001: QLHRMECMAQ EPVLFEDILC QIVDMIGPEN EGYITLRDVK GSKLSGNVFN ILFNLNKFIT FETRDPFLIR QEREDPNLTE WDRFAHREYI RLSMEEDGED
101: MSNASGDVWE ESLEAPF

Best Arabidopsis Sequence Match ( AT1G03960.3 )
(BLAST)

001: MVDQVFSNYI DGLHVDEFKS ITKQVCKLPS FLSPALFRKI DPNCTDIVTR DAFIKYWIDG NMLTMDTASQ IYNILRQQGC SYLRQADFKP VLDELLATHP
101: GLEFLRTISE FQERYAETVI YRIFYYINRS GTGCLTLREL RRGNLIAAMQ QLDEEDDINK IIRYFSYEHF YVIYCKFWEL DGDHDCFIDK DNLIKYGNNA
201: LTYRIVDRIF SQIPRKFTSK VEGKMSYEDF VYFILAEEDK SSEPSLEYWF KCVDLDGNGV ITSNEMQFFF EEQLHRMECI TQEAVLFSDI LCQIIDMIGP
301: EKENCITLQD LKGSKLSANV FNILFNLNKF MAFETRDPFL IRQEREDPNL TEWDRFAQRE YARLSMEEDV DEVSNGSADV WDEPLEPPF

Arabidopsis Description

B''EPSILONProbable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q84JI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.