CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97049	Soybean	cytosol	66.67	6.49
KRH34399	Soybean	cytosol	90.91	5.55
KRH68797	Soybean	cytosol	69.7	4.28
KRH34156	Soybean	cytosol	60.61	3.72
GSMUA_Achr8P19010_001	Banana	cytosol	36.36	3.66
KRG92626	Soybean	cytosol	57.58	3.54
GSMUA_Achr11P...	Banana	cytosol	57.58	3.51
GSMUA_AchrUn_...	Banana	cytosol	57.58	3.51
TraesCS1D01G152300.1	Wheat	cytosol	51.52	3.14
TraesCS1B01G171200.1	Wheat	cytosol	51.52	3.14
TraesCS1A01G153900.1	Wheat	cytosol	51.52	3.14
HORVU1Hr1G040980.1	Barley	cytosol	48.48	2.96
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	48.48	2.96
Zm00001d032708_P009	Maize	cytosol	45.45	2.78
EER94083	Sorghum	cytosol	45.45	2.77
Zm00001d014037_P004	Maize	cytosol	42.42	2.44
KRG92395	Soybean	cytosol	6.06	2.35
KRH02218	Soybean	cytosol	9.09	0.63
KRH50907	Soybean	cytosol	9.09	0.63
KRH62662	Soybean	cytosol	0.0	0.0
KRG97048	Soybean	nucleus	0.0	0.0
KRG92401	Soybean	cytosol, plastid	0.0	0.0
KRG92396	Soybean	cytosol	0.0	0.0
KRG92392	Soybean	cytosol	0.0	0.0
VIT_14s0036g00730.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EMBL:ACUP02012749	EnsemblPlants:KRG92399	EnsemblPlantsGene:GLYMA_20G2085005	ProteinID:KRG92398.1	ProteinID:KRG92399	ProteinID:KRG92399.1
UniParc:UPI0006EDE4B0	UniParc:UPI000C874F8E	UniProt:A0A0R0EE55	UniProt:A0A2K7F9N9	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr20:-:44489509..44489614

Molecular Weight (calculated)

4082.0 Da

IEP (calculated)

6.496

GRAVY (calculated)

-0.230

Length

33 amino acids

Sequence
(BLAST)

1: DQFIDYWIRG NMLAMDLPTQ IYTILKQPYR TYL

Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)

001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF

Arabidopsis Description

B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.