Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P19010_001 | Banana | cytosol | 59.33 | 97.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 90.94 | 90.77 |
| KRG92395 | Soybean | cytosol | 13.86 | 88.24 |
| KRG97049 | Soybean | cytosol | 54.9 | 87.61 |
| KRG92392 | Soybean | cytosol | 18.3 | 84.62 |
| KRG92396 | Soybean | cytosol | 12.01 | 84.42 |
| EER94083 | Sorghum | cytosol | 81.52 | 81.52 |
| Os10t0476600-01 | Rice | cytosol, plasma membrane, plastid | 81.33 | 81.33 |
| CDY71370 | Canola | extracellular | 36.04 | 81.25 |
| Zm00001d032708_P009 | Maize | cytosol | 80.78 | 80.93 |
| TraesCS1A01G153900.1 | Wheat | cytosol | 80.59 | 80.59 |
| HORVU1Hr1G040980.1 | Barley | cytosol | 80.59 | 80.59 |
| TraesCS1D01G152300.1 | Wheat | cytosol | 80.41 | 80.41 |
| TraesCS1B01G171200.1 | Wheat | cytosol | 80.22 | 80.22 |
| KRH62662 | Soybean | cytosol | 7.76 | 79.25 |
| KRH68797 | Soybean | cytosol | 78.37 | 78.96 |
| KRG92626 | Soybean | cytosol | 77.26 | 77.84 |
| Solyc04g010070.2.1 | Tomato | plastid | 77.45 | 77.74 |
| KRH34156 | Soybean | cytosol | 76.71 | 77.28 |
| Solyc05g054980.2.1 | Tomato | cytosol | 76.53 | 76.81 |
| VIT_07s0005g03730.t01 | Wine grape | cytosol | 77.63 | 76.78 |
| CDY48668 | Canola | cytosol | 76.34 | 76.77 |
| CDX86212 | Canola | cytosol | 76.34 | 76.77 |
| Bra010012.1-P | Field mustard | cytosol | 76.34 | 76.77 |
| Zm00001d014037_P004 | Maize | cytosol | 80.41 | 75.78 |
| AT5G28850.2 | Thale cress | cytosol | 74.86 | 75.56 |
| AT5G28900.1 | Thale cress | cytosol | 74.86 | 75.56 |
| KRH34399 | Soybean | cytosol | 74.31 | 74.31 |
| CDY57012 | Canola | cytosol | 73.57 | 74.12 |
| Bra036126.1-P | Field mustard | cytosol | 73.57 | 74.12 |
| Bra021340.1-P | Field mustard | cytosol | 73.01 | 73.15 |
| CDY44814 | Canola | cytosol | 73.01 | 73.15 |
| CDY00020 | Canola | cytosol | 72.64 | 72.64 |
| AT1G54450.1 | Thale cress | cytosol | 71.72 | 72.52 |
| CDY13127 | Canola | cytosol | 69.87 | 71.05 |
| Bra027527.1-P | Field mustard | cytosol | 69.5 | 70.54 |
| CDY36971 | Canola | cytosol | 68.76 | 70.19 |
| AT1G03960.1 | Thale cress | cytosol | 68.02 | 69.57 |
| CDX86655 | Canola | cytosol | 66.73 | 68.5 |
| Bra030551.1-P | Field mustard | cytosol | 67.47 | 68.1 |
| CDY15483 | Canola | cytosol | 67.1 | 67.98 |
| GSMUA_Achr8P19030_001 | Banana | cytosol | 27.36 | 67.89 |
| KRG97048 | Soybean | nucleus | 23.66 | 64.97 |
| AT5G44090.2 | Thale cress | endoplasmic reticulum, extracellular | 66.36 | 62.65 |
| VIT_14s0036g00750.t01 | Wine grape | cytosol | 59.15 | 61.66 |
| KRG92401 | Soybean | cytosol, plastid | 17.38 | 59.49 |
| VIT_14s0036g00730.t01 | Wine grape | extracellular | 19.78 | 58.15 |
| KRG92399 | Soybean | cytosol | 3.51 | 57.58 |
| GSMUA_Achr9P20250_001 | Banana | extracellular, golgi | 13.31 | 23.0 |
| GSMUA_Achr1P14730_001 | Banana | cytosol | 19.04 | 21.11 |
| GSMUA_Achr9P20260_001 | Banana | cytosol, mitochondrion | 4.81 | 20.16 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P00850_001 | EnsemblPlants:GSMUA_Achr11T00850_001 | EnsemblPlantsGene:GSMUA_Achr11G00850_001 | Gene3D:1.10.238.10 | Gene3D:1.10.238.220 | Gene3D:1.10.238.230 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| InterPro:IPR002048 | PANTHER:PTHR14095 | PANTHER:PTHR14095:SF7 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 |
| SEG:seg | SUPFAM:SSF47473 | UniParc:UPI000295CFC9 | UniProt:M0RNB6 | MapMan:18.4.24.1.2.4 | : |
Description
serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G00850_001]
Coordinates
chr11:+:543291..554617
Molecular Weight (calculated)
62380.3 Da
IEP (calculated)
4.714
GRAVY (calculated)
-0.392
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSETVRYVA SFDPELLQLP ELSHLALKER PKMAEELYFQ WLSLPETGKL VKSLIEDVKS GSPLNAAGSS STSNAATNSS LPSMFPAGSA PPLSPRSTSG
101: SPRFMKRSSG AGPSPFGSPL KLVSEPVKEV IPQFYFQNGR PPPKAMKDQC LSRIDYLFFG NMDGLQIQEF KTVTKEICKL PSFLSSSLFR KIDVECTGMV
201: TRDAFIVYWV NGNMMTKDIA TQIFTILKQA DRKYLTQEDF KPVLRELLAT HPGLEFLQGT PEFQERYAET VIYRIFYYMN RSGNGQLTLR ELKHGDLIAA
301: MQHAEEEEDI NKVLRYFSYE HFYVIYCKFW ELDTDHDFLI DKENLIRYGN HALTYRIVER IFSQVPRKFK SKADGKMGYE DFVYFILAEE DKSAEPSLEY
401: WFKCIDLDGN GILTANEMQF FYEEQLHRME CMAQEPVLFE DILCQMIDMI GPENESYFTL HDLKGGKLSG NIFNILFNLN KFMAFETRDP FLIRQERENP
501: TLTEWDRFAH REYIRLSMEE DGEDASNGSG DIWDESLEAP F
101: SPRFMKRSSG AGPSPFGSPL KLVSEPVKEV IPQFYFQNGR PPPKAMKDQC LSRIDYLFFG NMDGLQIQEF KTVTKEICKL PSFLSSSLFR KIDVECTGMV
201: TRDAFIVYWV NGNMMTKDIA TQIFTILKQA DRKYLTQEDF KPVLRELLAT HPGLEFLQGT PEFQERYAET VIYRIFYYMN RSGNGQLTLR ELKHGDLIAA
301: MQHAEEEEDI NKVLRYFSYE HFYVIYCKFW ELDTDHDFLI DKENLIRYGN HALTYRIVER IFSQVPRKFK SKADGKMGYE DFVYFILAEE DKSAEPSLEY
401: WFKCIDLDGN GILTANEMQF FYEEQLHRME CMAQEPVLFE DILCQMIDMI GPENESYFTL HDLKGGKLSG NIFNILFNLN KFMAFETRDP FLIRQERENP
501: TLTEWDRFAH REYIRLSMEE DGEDASNGSG DIWDESLEAP F
001: MVDTVIPGDM ACLDADLLQL QEMSSFVLNS KPGFTQKLFD QWLSLPEAQR QVGSLLKDAV AGAPINVTGS ASGSNSATIP SMFPAGSAPP LSPRSCGSPR
101: TTKQRAPSNL GSTLKVVNEP VKEPIPQFYF QNGRPPPSEI KEQCMFRINH FFYGHMDGLQ IQEFKLVTRE ICKLPSFFST SLFRKIDLNN TGFVTRDAFI
201: DFWVNGNMLI MDTTTQIFKI LKQKDQSFIV KDDFKPLLKE LLATHPGLEF LQSTPEFQER YAETVTYRIF YYINRSGNGR ITFRELKRGN LIDAMLHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLM RYGNHALTYR IVDRIFSQVA RKFTSKVEGK MGYEDFVYFI LAEEDKSSVP SLEYWFKCID
401: LDANGIITRN EMQFFYEEQL HRMECMAQEA VLFEDILCQM IDMIGPENES HITLHDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RENPTLTDWD
501: RFAHREYIRL SMEEDVEDAS NGSAEVWDDS SLEAPF
101: TTKQRAPSNL GSTLKVVNEP VKEPIPQFYF QNGRPPPSEI KEQCMFRINH FFYGHMDGLQ IQEFKLVTRE ICKLPSFFST SLFRKIDLNN TGFVTRDAFI
201: DFWVNGNMLI MDTTTQIFKI LKQKDQSFIV KDDFKPLLKE LLATHPGLEF LQSTPEFQER YAETVTYRIF YYINRSGNGR ITFRELKRGN LIDAMLHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLM RYGNHALTYR IVDRIFSQVA RKFTSKVEGK MGYEDFVYFI LAEEDKSSVP SLEYWFKCID
401: LDANGIITRN EMQFFYEEQL HRMECMAQEA VLFEDILCQM IDMIGPENES HITLHDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RENPTLTDWD
501: RFAHREYIRL SMEEDVEDAS NGSAEVWDDS SLEAPF
Arabidopsis Description
B''BETASerine/threonine protein phosphatase 2A regulatory subunit B''beta [Source:UniProtKB/Swiss-Prot;Acc:Q5QIT3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.