Factsheet for Bra030551.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15483	Canola	cytosol	97.01	97.38
CDX86655	Canola	cytosol	94.22	95.83
AT1G03960.1	Thale cress	cytosol	86.38	87.52
Bra027527.1-P	Field mustard	cytosol	79.48	79.92
GSMUA_Achr8P19010_001	Banana	cytosol	47.2	77.13
VIT_07s0005g03730.t01	Wine grape	cytosol	71.46	70.02
Zm00001d032708_P009	Maize	cytosol	68.84	68.33
KRH62662	Soybean	cytosol	6.72	67.92
EER94083	Sorghum	cytosol	68.47	67.84
GSMUA_Achr11P...	Banana	cytosol	68.1	67.47
HORVU1Hr1G040980.1	Barley	cytosol	68.1	67.47
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	68.1	67.47
TraesCS1B01G171200.1	Wheat	cytosol	68.1	67.47
TraesCS1A01G153900.1	Wheat	cytosol	67.91	67.28
GSMUA_AchrUn_...	Banana	cytosol	67.91	67.16
TraesCS1D01G152300.1	Wheat	cytosol	67.72	67.1
Bra010012.1-P	Field mustard	cytosol	66.6	66.36
Bra036126.1-P	Field mustard	cytosol	64.55	64.43
Bra021340.1-P	Field mustard	cytosol	64.55	64.07
Zm00001d014037_P004	Maize	cytosol	68.1	63.59
Bra002169.1-P	Field mustard	nucleus	18.28	20.42
Bra023686.1-P	Field mustard	nucleus	18.28	20.33

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	MapMan:18.4.24.1.2.4	EnsemblPlantsGene:Bra030551	EnsemblPlants:Bra030551.1
EnsemblPlants:Bra030551.1-P	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	UniProt:M4EP31	PFAM:PF13499	PFAM:PF13833	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7	SUPFAM:SSF47473	UniParc:UPI00025458B2	SEG:seg

Description

AT1G03960 (E=2e-247) | calcium-binding EF hand family protein

Coordinates

chrA08:-:21362343..21365761

Molecular Weight (calculated)

62102.0 Da

IEP (calculated)

4.776

GRAVY (calculated)

-0.362

Length

536 amino acids

Sequence
(BLAST)

001: MKMDIVGVED VHILDPELLQ LPCLSPSPLK ASSHIADELF SHWLSLPETA TLVKSLIDEA KSATPTNLSK SYATINVPGA TPLVFLSNGT PPLSPRSSPG
101: SPRFSRQRAS PPSLRSPLRS VKEPKHELIP QFYFLHGRPP AKELKEQCIS MVDHFFSNFI DGLHVDEFKS ITKEVCKLPS YLSPALFRKM DPDCTGIVTR
201: DAFIKYWIDG NMLTMDTASQ IYNILRQQDC MYLRQADFKP LLDELLATHP GLQFLRTTSE FQERYAETVI YRIFYYINRS GTGCLTLREL KRGNLIAAMQ
301: QLDEEDDINK IIRYFSYEHF YVIYCRFWEL DGDHDCYIDK DNLIKYGNHA LTYRIVDRIF SQAPRKFTSK VEGKMSYEDF VYFILAEEDK SSEPSLEYWF
401: KCIDLDGNGV ITPNEIQFFF EEQLHRMESI TQEPVHFNDI LCQIIDMIKP EEENCITLQD LKGSKLSGNV FNILFNLNKF MAFETRDPFL IRQEREDPSL
501: TEWDRFAQRE YVRLSMEEDV EEVSNGSADE PLEPPF

Best Arabidopsis Sequence Match ( AT1G03960.1 )
(BLAST)

001: MDIDGVDDDL HILDPELLQL PGLSPSPLKP TSLIADDLFS QWLSLPETAT LVKSLIDDAK SGTPTNKSKN LPSVFLSSST PPLSPRSSSG SPRFSRQRTS
101: PPSLHSPLRS LKEPKRQLIP QFYYQHGRPP AKELKEQCLS MVDQVFSNYI DGLHVDEFKS ITKQVCKLPS FLSPALFRKI DPNCTDIVTR DAFIKYWIDG
201: NMLTMDTASQ IYNILRQQGC SYLRQADFKP VLDELLATHP GLEFLRTISE FQERYAETVI YRIFYYINRS GTGCLTLREL RRGNLIAAMQ QLDEEDDINK
301: IIRYFSYEHF YVIYCKFWEL DGDHDCFIDK DNLIKYGNNA LTYRIVDRIF SQIPRKFTSK VEGKMSYEDF VYFILAEEDK SSEPSLEYWF KCVDLDGNGV
401: ITSNEMQFFF EEQLHRMECI TQEAVLFSDI LCQIIDMIGP EKENCITLQD LKGSKLSANV FNILFNLNKF MAFETRDPFL IRQEREDPNL TEWDRFAQRE
501: YARLSMEEDV DEVSNGSADV WDEPLEPPF

Arabidopsis Description

B''EPSILONProbable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q84JI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.