CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030551.1-P	Field mustard	cytosol	95.83	94.22
CDY15483	Canola	cytosol	94.5	93.26
AT1G03960.1	Thale cress	cytosol	86.34	86.01
CDY13127	Canola	cytosol	78.37	77.63
CDY36971	Canola	cytosol	77.99	77.55
GSMUA_Achr8P19010_001	Banana	cytosol	48.01	77.13
CDY71370	Canola	extracellular	35.1	77.08
VIT_07s0005g03730.t01	Wine grape	cytosol	71.54	68.92
KRH62662	Soybean	cytosol	6.83	67.92
Zm00001d032708_P009	Maize	cytosol	69.07	67.41
EER94083	Sorghum	cytosol	68.69	66.91
GSMUA_Achr11P...	Banana	cytosol	68.5	66.73
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	68.5	66.73
HORVU1Hr1G040980.1	Barley	cytosol	68.31	66.54
TraesCS1B01G171200.1	Wheat	cytosol	68.31	66.54
CDY48668	Canola	cytosol	67.93	66.54
CDX86212	Canola	cytosol	67.93	66.54
GSMUA_AchrUn_...	Banana	cytosol	68.31	66.42
TraesCS1A01G153900.1	Wheat	cytosol	68.12	66.36
TraesCS1D01G152300.1	Wheat	cytosol	67.93	66.17
CDY57012	Canola	cytosol	66.22	64.99
CDY00020	Canola	cytosol	66.41	64.69
CDY44814	Canola	cytosol	65.46	63.89
Zm00001d014037_P004	Maize	cytosol	68.5	62.89
CDY13902	Canola	cytosol	17.46	20.58
CDX70827	Canola	nucleus	17.84	19.96
CDY58103	Canola	nucleus	18.03	19.71
CDY02615	Canola	nucleus	18.03	19.71
CDX92599	Canola	nucleus	17.84	19.58
CDX88930	Canola	nucleus	17.84	19.18

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	MapMan:18.4.24.1.2.4	GO:A0A078DBQ2	EnsemblPlants:CDX86655
ProteinID:CDX86655	ProteinID:CDX86655.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00145323001	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7	SUPFAM:SSF47473	UniParc:UPI0004EB7879	SEG:seg

Description

BnaC08g00480D

Coordinates

chrLK031846:-:1405168..1409025

Molecular Weight (calculated)

61121.7 Da

IEP (calculated)

4.856

GRAVY (calculated)

-0.379

Length

527 amino acids

Sequence
(BLAST)

001: MKMDIVGVED VHILDPNLLQ LPCLSPSPLN SSSYIADELF SHWLSLPETA TLVKCLIDEA KSGTPTNLSK SYATVFLSNG TPPLSPRSSP GSPRFSRHRA
101: SPPSLRSPLR SVKEPKHELI PQFYFLHGRP PAKELKEQCI SMVDHFFSNF IDGLHVDEFK SVTKEVCKLP SFLSPALFRK MDSDCSGVVT RDAFIKYWID
201: GNMLTMDTAS QIYNILKQQD CKHLRQADFK PLLDELLATH PGLQFLRTTS EFQERYAETV IYRIFYYINR SGTGCLTLRE LKRGNLIAAM QQLDEEDDIN
301: KIIRYFSYEH FYVIYCRFWE LDGDHDCYID KDNLIKYGNH ALTYRIVDRI FSQAPRKFTS KVEGKMSYED FVYFILAEED KSSEPSLEYW FKCIDLDGNG
401: VITPNEIQFF FEEQLHRMES ITQEPVHFND ILCQIIDMIK PEEENCITLQ DLKGSKLSGN VFNILFNLNK FMAFETRDPF LIRQEREDPS LTEWDRFAQR
501: EYVRLSMEED VEEVANGSAD EPLEPPF

Best Arabidopsis Sequence Match ( AT1G03960.1 )
(BLAST)

001: MDIDGVDDDL HILDPELLQL PGLSPSPLKP TSLIADDLFS QWLSLPETAT LVKSLIDDAK SGTPTNKSKN LPSVFLSSST PPLSPRSSSG SPRFSRQRTS
101: PPSLHSPLRS LKEPKRQLIP QFYYQHGRPP AKELKEQCLS MVDQVFSNYI DGLHVDEFKS ITKQVCKLPS FLSPALFRKI DPNCTDIVTR DAFIKYWIDG
201: NMLTMDTASQ IYNILRQQGC SYLRQADFKP VLDELLATHP GLEFLRTISE FQERYAETVI YRIFYYINRS GTGCLTLREL RRGNLIAAMQ QLDEEDDINK
301: IIRYFSYEHF YVIYCKFWEL DGDHDCFIDK DNLIKYGNNA LTYRIVDRIF SQIPRKFTSK VEGKMSYEDF VYFILAEEDK SSEPSLEYWF KCVDLDGNGV
401: ITSNEMQFFF EEQLHRMECI TQEAVLFSDI LCQIIDMIGP EKENCITLQD LKGSKLSANV FNILFNLNKF MAFETRDPFL IRQEREDPNL TEWDRFAQRE
501: YARLSMEEDV DEVSNGSADV WDEPLEPPF

Arabidopsis Description

B''EPSILONProbable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q84JI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.