Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030551.1-P | Field mustard | cytosol | 97.38 | 97.01 |
| CDX86655 | Canola | cytosol | 93.26 | 94.5 |
| AT1G03960.1 | Thale cress | cytosol | 85.77 | 86.58 |
| CDY36971 | Canola | cytosol | 78.65 | 79.25 |
| CDY13127 | Canola | cytosol | 78.84 | 79.14 |
| GSMUA_Achr8P19010_001 | Banana | cytosol | 47.38 | 77.13 |
| CDY71370 | Canola | extracellular | 34.64 | 77.08 |
| VIT_07s0005g03730.t01 | Wine grape | cytosol | 70.97 | 69.29 |
| KRH62662 | Soybean | cytosol | 6.74 | 67.92 |
| Zm00001d032708_P009 | Maize | cytosol | 68.35 | 67.59 |
| GSMUA_Achr11P... | Banana | cytosol | 67.98 | 67.1 |
| Os10t0476600-01 | Rice | cytosol, plasma membrane, plastid | 67.98 | 67.1 |
| EER94083 | Sorghum | cytosol | 67.79 | 66.91 |
| HORVU1Hr1G040980.1 | Barley | cytosol | 67.79 | 66.91 |
| TraesCS1B01G171200.1 | Wheat | cytosol | 67.79 | 66.91 |
| TraesCS1A01G153900.1 | Wheat | cytosol | 67.6 | 66.73 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.6 | 66.61 |
| TraesCS1D01G152300.1 | Wheat | cytosol | 67.42 | 66.54 |
| CDY48668 | Canola | cytosol | 66.67 | 66.17 |
| CDX86212 | Canola | cytosol | 66.67 | 66.17 |
| CDY57012 | Canola | cytosol | 64.61 | 64.25 |
| CDY00020 | Canola | cytosol | 64.42 | 63.59 |
| CDY44814 | Canola | cytosol | 64.04 | 63.33 |
| Zm00001d014037_P004 | Maize | cytosol | 67.42 | 62.72 |
| CDY13902 | Canola | cytosol | 17.42 | 20.81 |
| CDX70827 | Canola | nucleus | 18.16 | 20.59 |
| CDY58103 | Canola | nucleus | 18.35 | 20.33 |
| CDY02615 | Canola | nucleus | 18.35 | 20.33 |
| CDX92599 | Canola | nucleus | 18.16 | 20.21 |
| CDX88930 | Canola | nucleus | 18.16 | 19.8 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.238.220 | Gene3D:1.10.238.230 | MapMan:18.4.24.1.2.4 | GO:A0A078FT59 | UniProt:A0A078FT59 |
| EnsemblPlants:CDY15483 | ProteinID:CDY15483 | ProteinID:CDY15483.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00089653001 | InterPro:IPR002048 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR14095 | PANTHER:PTHR14095:SF7 | SUPFAM:SSF47473 | UniParc:UPI0004EF3FA9 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g27670DBnaA08g27670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT59]
Coordinates
chrLK032055:+:195050..198945
Molecular Weight (calculated)
61843.6 Da
IEP (calculated)
4.817
GRAVY (calculated)
-0.375
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIVGVEDVH ILDPDLLQLP CLSPSPLKAS SHIADELFSH WLSLPETATL VKCLIDEAKS ATPTNLSKSY ATINVPGATP LVFLSNGTPP LSPRSSPGSP
101: RFSRQRASPP SLRSPLRSVK EPKHELIPQF YFLHGRPPAK ELKEQCISMV DHFFSNFIDG LHVDEFKSIT KEVCKLPSYL SPALFRKMDP ESSGIVTRDA
201: FIKYWIDGNM LTMDTASQIY NILRQQDCKH LTQADFKPLL DELLATHPGL QFLRTTSEFQ ERYAETVIYR IFYYINRSRT GCLTLRELKR GNLIAAMQQL
301: DEEDDINKII RYFSYEHFYV IYCRFWELDG DHDCYIDKDN LIKYGNHALT YRIVDRIFSQ APRKFTSKVE GKMSYEDFVY FILAEEDKSS EPSLEYWFKC
401: IDLDGNGVIT PNEIQFFFEE QLHRMESITQ EPVHFNDILC QIIDMIKPEE ENCITLQDLK GSKLSGNVFN ILFNLNKFMA FETRDPFLIR QEREDPSLTE
501: WDRFAQREYV RLSMEEDVEE VSNGSADEPL EPPF
101: RFSRQRASPP SLRSPLRSVK EPKHELIPQF YFLHGRPPAK ELKEQCISMV DHFFSNFIDG LHVDEFKSIT KEVCKLPSYL SPALFRKMDP ESSGIVTRDA
201: FIKYWIDGNM LTMDTASQIY NILRQQDCKH LTQADFKPLL DELLATHPGL QFLRTTSEFQ ERYAETVIYR IFYYINRSRT GCLTLRELKR GNLIAAMQQL
301: DEEDDINKII RYFSYEHFYV IYCRFWELDG DHDCYIDKDN LIKYGNHALT YRIVDRIFSQ APRKFTSKVE GKMSYEDFVY FILAEEDKSS EPSLEYWFKC
401: IDLDGNGVIT PNEIQFFFEE QLHRMESITQ EPVHFNDILC QIIDMIKPEE ENCITLQDLK GSKLSGNVFN ILFNLNKFMA FETRDPFLIR QEREDPSLTE
501: WDRFAQREYV RLSMEEDVEE VSNGSADEPL EPPF
001: MDIDGVDDDL HILDPELLQL PGLSPSPLKP TSLIADDLFS QWLSLPETAT LVKSLIDDAK SGTPTNKSKN LPSVFLSSST PPLSPRSSSG SPRFSRQRTS
101: PPSLHSPLRS LKEPKRQLIP QFYYQHGRPP AKELKEQCLS MVDQVFSNYI DGLHVDEFKS ITKQVCKLPS FLSPALFRKI DPNCTDIVTR DAFIKYWIDG
201: NMLTMDTASQ IYNILRQQGC SYLRQADFKP VLDELLATHP GLEFLRTISE FQERYAETVI YRIFYYINRS GTGCLTLREL RRGNLIAAMQ QLDEEDDINK
301: IIRYFSYEHF YVIYCKFWEL DGDHDCFIDK DNLIKYGNNA LTYRIVDRIF SQIPRKFTSK VEGKMSYEDF VYFILAEEDK SSEPSLEYWF KCVDLDGNGV
401: ITSNEMQFFF EEQLHRMECI TQEAVLFSDI LCQIIDMIGP EKENCITLQD LKGSKLSANV FNILFNLNKF MAFETRDPFL IRQEREDPNL TEWDRFAQRE
501: YARLSMEEDV DEVSNGSADV WDEPLEPPF
101: PPSLHSPLRS LKEPKRQLIP QFYYQHGRPP AKELKEQCLS MVDQVFSNYI DGLHVDEFKS ITKQVCKLPS FLSPALFRKI DPNCTDIVTR DAFIKYWIDG
201: NMLTMDTASQ IYNILRQQGC SYLRQADFKP VLDELLATHP GLEFLRTISE FQERYAETVI YRIFYYINRS GTGCLTLREL RRGNLIAAMQ QLDEEDDINK
301: IIRYFSYEHF YVIYCKFWEL DGDHDCFIDK DNLIKYGNNA LTYRIVDRIF SQIPRKFTSK VEGKMSYEDF VYFILAEEDK SSEPSLEYWF KCVDLDGNGV
401: ITSNEMQFFF EEQLHRMECI TQEAVLFSDI LCQIIDMIGP EKENCITLQD LKGSKLSANV FNILFNLNKF MAFETRDPFL IRQEREDPNL TEWDRFAQRE
501: YARLSMEEDV DEVSNGSADV WDEPLEPPF
Arabidopsis Description
B''EPSILONProbable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q84JI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.