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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d000227_P001
Zm00001d002405_P001
Zm00001d004086_P001
Zm00001d008306_P012
Zm00001d012549_P001
Zm00001d014150_P005
Zm00001d014756_P006
Zm00001d016457_P001
Zm00001d018033_P001
Zm00001d018045_P001
Zm00001d020412_P001
Zm00001d023732_P002
Zm00001d024376_P001
Zm00001d026252_P001
Zm00001d028405_P002
Zm00001d030305_P001
Zm00001d030314_P001
Zm00001d030316_P001
Zm00001d030601_P001
Zm00001d032239_P001
Zm00001d033225_P002
Zm00001d037221_P001
Zm00001d037234_P005
Zm00001d040317_P005
Zm00001d041650_P001
Zm00001d044836_P001
Zm00001d047933_P001
Zm00001d047934_P001
Zm00001d050195_P001
Zm00001d050368_P001
Zm00001d050595_P001
Zm00001d052256_P001
Zm00001d052263_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G28900.1 Zm00001d020412_P001 AT1G14900.1 21798944
AT5G28900.1 Zm00001d032239_P001 AT1G14900.1 21798944
AT5G28900.1 Zm00001d050368_P001 AT1G14900.1 21798944
AT5G28900.1 Zm00001d014756_P006 AT1G15570.1 21798944
AT5G28900.1 Zm00001d023732_P002 AT1G15570.1 21798944
AT5G28900.1 Zm00001d000227_P001 AT1G30120.1 21798944
AT5G28900.1 Zm00001d033225_P002 AT1G30120.1 21798944
AT5G28900.1 Zm00001d008306_P012 AT1G75400.1 21798944
AT5G28900.1 Zm00001d040317_P005 AT1G75400.1 21798944
AT5G28900.1 Zm00001d014150_P005 AT3G01180.1 21798944
AT5G28900.1 Zm00001d018033_P001 AT3G01180.1 21798944
AT5G28900.1 Zm00001d037234_P005 AT3G01180.1 21798944
AT5G28900.1 Zm00001d052263_P001 AT3G01180.1 21798944
AT5G28900.1 Zm00001d018045_P001 AT3G47620.1 21798944
AT5G28900.1 Zm00001d037221_P001 AT3G47620.1 21798944
AT5G28900.1 Zm00001d044836_P001 AT3G47620.1 21798944
AT5G28900.1 Zm00001d052256_P001 AT3G47620.1 21798944
AT5G28900.1 Zm00001d012549_P001 AT3G60360.1 21798944
AT5G28900.1 Zm00001d041650_P001 AT3G60360.1 21798944
AT5G28900.1 Zm00001d050595_P001 AT3G60360.1 21798944
AT5G28900.1 Zm00001d002405_P001 AT4G31550.1 21798944
AT5G28900.1 Zm00001d004086_P001 AT4G31550.1 21798944
AT5G28900.1 Zm00001d016457_P001 AT4G31550.1 21798944
AT5G28900.1 Zm00001d024376_P001 AT4G31550.1 21798944
AT5G28900.1 Zm00001d026252_P001 AT4G31550.1 21798944
AT5G28900.1 Zm00001d050195_P001 AT4G31550.1 21798944
AT5G28900.1 Zm00001d028405_P002 AT4G38770.1 21798944
AT5G28900.1 Zm00001d030305_P001 AT4G38770.1 21798944
AT5G28900.1 Zm00001d030314_P001 AT4G38770.1 21798944
AT5G28900.1 Zm00001d030316_P001 AT4G38770.1 21798944
AT5G28900.1 Zm00001d047933_P001 AT4G38770.1 21798944
AT5G28900.1 Zm00001d047934_P001 AT4G38770.1 21798944
AT5G28900.1 Zm00001d030601_P001 AT5G14390.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER94083 Sorghum cytosol 91.29 96.86
Zm00001d032708_P009 Maize cytosol 90.59 96.3
HORVU1Hr1G040980.1 Barley cytosol 85.54 90.76
Os10t0476600-01 Rice cytosol, plasma membrane, plastid 85.54 90.76
TraesCS1A01G153900.1 Wheat cytosol 85.02 90.2
TraesCS1D01G152300.1 Wheat cytosol 84.84 90.02
TraesCS1B01G171200.1 Wheat cytosol 84.67 89.83
KRG92395 Soybean cytosol 13.24 89.41
GSMUA_Achr8P19010_001 Banana cytosol 50.35 88.11
KRG92396 Soybean cytosol 11.32 84.42
KRG97049 Soybean cytosol 49.48 83.78
KRG92392 Soybean cytosol 17.07 83.76
KRH62662 Soybean cytosol 7.49 81.13
GSMUA_Achr11P... Banana cytosol 75.78 80.41
GSMUA_AchrUn_... Banana cytosol 75.78 80.26
CDY71370 Canola extracellular 33.28 79.58
VIT_07s0005g03730.t01 Wine grape cytosol 72.65 76.23
KRH68797 Soybean cytosol 70.56 75.42
KRG92626 Soybean cytosol 70.03 74.86
KRH34156 Soybean cytosol 70.03 74.86
Solyc04g010070.2.1 Tomato plastid 69.51 74.03
Solyc05g054980.2.1 Tomato cytosol 68.99 73.47
CDY48668 Canola cytosol 68.64 73.23
CDX86212 Canola cytosol 68.64 73.23
Bra010012.1-P Field mustard cytosol 68.64 73.23
KRH34399 Soybean cytosol 68.64 72.83
AT5G28900.1 Thale cress cytosol 66.55 71.27
AT5G28850.2 Thale cress cytosol 66.55 71.27
Bra036126.1-P Field mustard cytosol 66.38 70.95
CDY57012 Canola cytosol 66.38 70.95
AT1G03960.1 Thale cress cytosol 65.16 70.7
AT1G54450.1 Thale cress cytosol 65.68 70.47
Bra021340.1-P Field mustard cytosol 65.68 69.81
CDY44814 Canola cytosol 65.68 69.81
CDY00020 Canola cytosol 65.68 69.69
CDY13127 Canola cytosol 64.29 69.36
Bra027527.1-P Field mustard cytosol 63.94 68.86
CDX86655 Canola cytosol 62.89 68.5
CDY36971 Canola cytosol 63.24 68.49
Bra030551.1-P Field mustard cytosol 63.59 68.1
CDY15483 Canola cytosol 62.72 67.42
Zm00001d053702_P008 Maize cytosol 60.98 63.99
AT5G44090.2 Thale cress endoplasmic reticulum, extracellular 62.89 63.0
KRG92401 Soybean cytosol, plastid 17.07 62.03
KRG97048 Soybean nucleus 20.91 60.91
VIT_14s0036g00730.t01 Wine grape extracellular 19.34 60.33
Zm00001d015665_P007 Maize cytosol, plastid 60.8 59.76
VIT_14s0036g00750.t01 Wine grape cytosol 53.66 59.34
KRG92399 Soybean cytosol 2.44 42.42
Zm00001d010862_P002 Maize nucleus, plastid 17.25 20.08
Zm00001d019912_P001 Maize mitochondrion 9.06 19.77
Zm00001d024857_P002 Maize cytosol 16.9 19.4
Zm00001d003796_P003 Maize cytosol, mitochondrion 4.01 18.85
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.238.220Gene3D:1.10.238.230MapMan:18.4.24.1.2.4UniProt:A0A1D6GPK2ProteinID:AQK65109.1
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488GO:GO:0005509
InterPro:IPR002048PFAM:PF13499ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR14095PANTHER:PTHR14095:SF7
SUPFAM:SSF47473UniParc:UPI00084372AEEnsemblPlantsGene:Zm00001d014037EnsemblPlants:Zm00001d014037_P004EnsemblPlants:Zm00001d014037_T004SEG:seg
Description
Serine/threonine protein phosphatase 2A regulatory subunit B''alpha
Coordinates
chr5:-:30097117..30113105
Molecular Weight (calculated)
65671.9 Da
IEP (calculated)
4.689
GRAVY (calculated)
-0.336
Length
574 amino acids
Sequence
(BLAST)
001: MEVEPARRDA AALDLELLQL AELAPGALRE NSIADALYAQ WLVLPETTKL VKSLIEDAKT GAVLNVAGSS TSTNAASSSS LPSMFPAGSA PPLSPRSTSG
101: SPRVMRRGSG AGPSSLGSPL KLVSEPVREV IPQFYFKNGR PPTKDLKEQC LSRTDHLFFG GEGLQIQEFR SVTKDICRLP SFFSSALFKK IDVACTGTVS
201: RFKYGSLTLS NHRDAFVEYW MDDNKITMDM ASQIFEILRK PGCTYLTQDD FKPVLKELLA THPGLEFLQG TPEFQERYAE TVIYRIFYSI NRSGNGHLTL
301: RELKRGNLIA ALQQLDEEED INKVLRYFSY EHFYVIYCKF WELDADHDFL IDKENLIKYG NHSLTYRIVD RIFTQIPRKF TSMTEGKMGY EDFVYFILSE
401: EDKSSEPSLE YWFKCIDLDG NGILTYNEMQ FFYEEQLHRM ECMAQEPVVF GDILCQMIDM IGPEVDSHTY PANILSGLDN YFSFLQNESY FTLRDLKRCK
501: LSGNIFNILF NLNKFMAFET RDPFLIRQER ENPTLTEWDR FAHREYIRLS MEEDGEDASN GSGDVWDESL EAPF
Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)
001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF
Arabidopsis Description
B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.