CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92395	Soybean	cytosol	15.53	98.82
KRG92392	Soybean	cytosol	21.26	98.29
KRG92396	Soybean	cytosol	13.86	97.4
KRG92401	Soybean	cytosol, plastid	28.1	96.2
KRG92399	Soybean	cytosol	5.55	90.91
KRG97049	Soybean	cytosol	53.97	86.14
GSMUA_Achr8P19010_001	Banana	cytosol	51.2	84.45
KRH68797	Soybean	cytosol	77.26	77.84
KRG92626	Soybean	cytosol	75.79	76.35
KRH34156	Soybean	cytosol	75.42	75.98
GSMUA_Achr11P...	Banana	cytosol	74.31	74.31
GSMUA_AchrUn_...	Banana	cytosol	73.94	73.8
KRH62662	Soybean	cytosol	7.21	73.58
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	73.57	73.57
EER94083	Sorghum	cytosol	73.38	73.38
Zm00001d032708_P009	Maize	cytosol	72.83	72.96
TraesCS1A01G153900.1	Wheat	cytosol	71.9	71.9
TraesCS1B01G171200.1	Wheat	cytosol	71.9	71.9
HORVU1Hr1G040980.1	Barley	cytosol	71.72	71.72
TraesCS1D01G152300.1	Wheat	cytosol	71.72	71.72
Zm00001d014037_P004	Maize	cytosol	72.83	68.64
KRG97048	Soybean	nucleus	23.11	63.45
VIT_14s0036g00730.t01	Wine grape	extracellular	19.78	58.15
KRH50907	Soybean	cytosol	17.56	19.92
KRH02218	Soybean	cytosol	17.38	19.71

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	EntrezGene:100793000	MapMan:18.4.24.1.2.4	EMBL:ACUP02006597
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_10G181800	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	UniProt:I1LC62	InterPro:IPR002048	EnsemblPlants:KRH34399	ProteinID:KRH34399	ProteinID:KRH34399.1
PFAM:PF13202	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7
SUPFAM:SSF47473	UniParc:UPI000233D22F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:41516211..41528077

Molecular Weight (calculated)

63033.8 Da

IEP (calculated)

4.627

GRAVY (calculated)

-0.403

Length

541 amino acids

Sequence
(BLAST)

001: MDVEETEELV VSLDPDLLQL PEVSPFALKS SPYVVEELFT QWLSLPDTCR LVKSLLADAK AGAPLNALEN STNTNALSIN SLPSLFPAGS TPPLSPRSSS
101: GSPRTTKQRN SPSLGSPLKL ASEPVREREV IPQFYFKNGR PPPSEMKEHF LYQIDSRFYG HLDGLQLHEF KSFTKELCKL PSFFSTALFK KIDVNFTGTI
201: SRDQFIDYWI RGNMLAMDLP TQIYTILKQP YRAYLVQDDF KPVLRELLST HPGLEFLQST PEFQERYAET VIHRIFYYMN RSGNGRLTLR ELKRGNLIDA
301: MLHVDEEEDI NKVLRYFSYE HFYVIYCKFW ELDTDHDFFI DRENLIKYGN HSLTYRIVDR IFSQVPRKFT SKIEGKMNYE DFVYFILAEE DKSSEPSLVY
401: WFKCIDLDGN GVLTPNEMQF FYEEQLHRME CMAQEPVLFE DILCQIVDMI GPENEGYITI RDVKGSKLSG NVFNILFNLN KFIAFETRDP FLIRQEREDP
501: NLTEWDRFAH REYIRLSMEE DGEDMSNASG DVWEESLEAP F

Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)

001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF

Arabidopsis Description

B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.