CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0036g00730.t01	Wine grape	extracellular	63.29	54.35
KRG97048	Soybean	nucleus	63.29	50.76
KRH34399	Soybean	cytosol	96.2	28.1
KRH68797	Soybean	cytosol	62.66	18.44
KRG92626	Soybean	cytosol	62.66	18.44
KRH34156	Soybean	cytosol	61.39	18.06
EER94083	Sorghum	cytosol	61.39	17.93
Zm00001d032708_P009	Maize	cytosol	60.13	17.59
GSMUA_Achr11P...	Banana	cytosol	59.49	17.38
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	59.49	17.38
GSMUA_AchrUn_...	Banana	cytosol	58.86	17.16
Zm00001d014037_P004	Maize	cytosol	62.03	17.07
HORVU1Hr1G040980.1	Barley	cytosol	55.7	16.27
TraesCS1A01G153900.1	Wheat	cytosol	55.7	16.27
TraesCS1B01G171200.1	Wheat	cytosol	55.7	16.27
TraesCS1D01G152300.1	Wheat	cytosol	55.7	16.27
KRH02218	Soybean	cytosol	14.56	4.82
KRH50907	Soybean	cytosol	14.56	4.82
KRG92399	Soybean	cytosol	0.0	0.0
KRG97049	Soybean	cytosol	0.0	0.0
KRG92396	Soybean	cytosol	0.0	0.0
KRG92395	Soybean	cytosol	0.0	0.0
KRH62662	Soybean	cytosol	0.0	0.0
KRG92392	Soybean	cytosol	0.0	0.0
GSMUA_Achr8P19010_001	Banana	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02012751	EnsemblPlants:KRG92401	EnsemblPlantsGene:GLYMA_20G2085001	Gene3D:1.10.238.230	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7
ProteinID:KRG92400.1	ProteinID:KRG92401	ProteinID:KRG92401.1	SEG:seg	UniParc:UPI0006ED9031	UniProt:A0A0R0EF29
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:44497104..44499436

Molecular Weight (calculated)

17363.8 Da

IEP (calculated)

10.375

GRAVY (calculated)

-0.354

Length

158 amino acids

Sequence
(BLAST)

001: LSLPDTVRLV KSLLADAKAG ARLSALENST NTNALSINSL PSLFPAGSTP PLSPRSSSGS PRTTKQRNSP SLGSPLKLAS EPVREREVIP QFYFKNGRPP
101: PSEMKEHFIY QIDSRFYGHL DGLQLHEFKS VTKELCKLPS FFSTALFKKI DVNFTGSI

Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)

001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF

Arabidopsis Description

B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.