Factsheet for VIT_14s0036g00730.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 3
extracellular 3
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92401	Soybean	cytosol, plastid	54.35	63.29
EER94083	Sorghum	cytosol	60.87	20.7
Zm00001d032708_P009	Maize	cytosol	60.33	20.56
HORVU1Hr1G040980.1	Barley	cytosol	59.78	20.33
TraesCS1D01G152300.1	Wheat	cytosol	59.78	20.33
TraesCS1A01G153900.1	Wheat	cytosol	59.78	20.33
GSMUA_AchrUn_...	Banana	cytosol	59.78	20.3
TraesCS1B01G171200.1	Wheat	cytosol	59.24	20.15
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	59.24	20.15
VIT_07s0005g03730.t01	Wine grape	cytosol	59.78	20.11
KRH34399	Soybean	cytosol	58.15	19.78
GSMUA_Achr11P...	Banana	cytosol	58.15	19.78
Zm00001d014037_P004	Maize	cytosol	60.33	19.34
VIT_05s0020g01710.t01	Wine grape	cytosol	16.3	6.3
KRG92395	Soybean	cytosol	1.63	3.53
VIT_14s0036g00750.t01	Wine grape	cytosol	9.78	3.47
GSMUA_Achr8P19010_001	Banana	cytosol	1.63	0.91
KRG92399	Soybean	cytosol	0.0	0.0
KRG92396	Soybean	cytosol	0.0	0.0
KRG92392	Soybean	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_14s0036g00730	EMBL:FN595241	EnsemblPlants:VIT_14s0036g00730.t01	EnsemblPlantsGene:VIT_14s0036g00730	Gene3D:1.10.238.230	PANTHER:PTHR14095
PANTHER:PTHR14095:SF7	ProteinID:CCB47647	ProteinID:CCB47647.1	SEG:seg	UniParc:UPI0002108CFF	UniProt:F6H608
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr14:+:10931959..10935050

Molecular Weight (calculated)

20192.5 Da

IEP (calculated)

10.525

GRAVY (calculated)

-0.095

Length

184 amino acids

Sequence
(BLAST)

001: MPKVRRKSKI SPEAFVVLLA FSKVTSLLND AKAGVPLNVP GNSSSTNAAA SNSLPSMFPA GSAPPLSPRS ISGSPRVMKQ RIGPSNLSSP LKLASEPVRE
101: LIPQFYFQNG RPPPNELKEQ CLFRINQVFY DHLDGLQIHE FRSVAKDICK LPTFLSTTLF RRIDVNFTGI VTREGVIFCS PSCF

Best Arabidopsis Sequence Match ( AT5G28900.1 )
(BLAST)

001: MVDTVIPGDM ACLDADLLQL QEMSSFVLNS KPGFTQKLFD QWLSLPEAQR QVGSLLKDAV AGAPINVTGS ASGSNSATIP SMFPAGSAPP LSPRSCGSPR
101: TTKQRAPSNL GSTLKVVNEP VKEPIPQFYF QNGRPPPSEI KEQCMFRINH FFYGHMDGLQ IQEFKLVTRE ICKLPSFFST SLFRKIDLNN TGFVTRDAFI
201: DFWVNGNMLI MDTTTQIFKI LKQKDQSFIV KDDFKPLLKE LLATHPGLEF LQSTPEFQER YAETVTYRIF YYINRSGNGR ITFRELKRGN LIDAMLHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLM RYGNHALTYR IVDRIFSQVA RKFTNKVEGK MGYEDFVYFI LAEEDKSSVP SLEYWFKCID
401: LDANGIITRN EMQFFYEEQL HRMECMAQEA VLFEDILCQM IDMIGPENES HITLHDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RENPTLTDWD
501: RFAHREYIRL SMEEDVEDAS NGSAEVWDES SLEAPF

Arabidopsis Description

B''GAMMAProbable serine/threonine protein phosphatase 2A regulatory subunit B''gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.