Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92395 | Soybean | cytosol | 22.71 | 90.59 |
| GSMUA_Achr8P19010_001 | Banana | cytosol | 85.55 | 88.41 |
| KRG92396 | Soybean | cytosol | 20.06 | 88.31 |
| KRH62662 | Soybean | cytosol | 13.57 | 86.79 |
| KRG92392 | Soybean | cytosol | 29.5 | 85.47 |
| CDY71370 | Canola | extracellular | 60.18 | 85.0 |
| KRG92399 | Soybean | cytosol | 6.49 | 66.67 |
| KRH68797 | Soybean | cytosol | 98.53 | 62.2 |
| KRH34156 | Soybean | cytosol | 95.28 | 60.15 |
| KRG92626 | Soybean | cytosol | 93.81 | 59.22 |
| Solyc04g010070.2.1 | Tomato | plastid | 89.38 | 56.22 |
| CDY48668 | Canola | cytosol | 89.09 | 56.13 |
| CDX86212 | Canola | cytosol | 89.09 | 56.13 |
| Bra010012.1-P | Field mustard | cytosol | 89.09 | 56.13 |
| CDY44814 | Canola | cytosol | 88.5 | 55.56 |
| Bra021340.1-P | Field mustard | cytosol | 88.5 | 55.56 |
| AT1G54450.1 | Thale cress | cytosol | 87.32 | 55.33 |
| AT5G28850.2 | Thale cress | cytosol | 87.02 | 55.04 |
| AT5G28900.1 | Thale cress | cytosol | 87.02 | 55.04 |
| Solyc05g054980.2.1 | Tomato | cytosol | 87.32 | 54.92 |
| GSMUA_Achr11P... | Banana | cytosol | 87.61 | 54.9 |
| Bra036126.1-P | Field mustard | cytosol | 86.43 | 54.56 |
| CDY57012 | Canola | cytosol | 86.43 | 54.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 86.73 | 54.24 |
| KRH34399 | Soybean | cytosol | 86.14 | 53.97 |
| CDY00020 | Canola | cytosol | 85.84 | 53.79 |
| Os10t0476600-01 | Rice | cytosol, plasma membrane, plastid | 85.55 | 53.6 |
| EER94083 | Sorghum | cytosol | 85.55 | 53.6 |
| TraesCS1A01G153900.1 | Wheat | cytosol | 85.25 | 53.42 |
| TraesCS1D01G152300.1 | Wheat | cytosol | 85.25 | 53.42 |
| HORVU1Hr1G040980.1 | Barley | cytosol | 84.96 | 53.23 |
| TraesCS1B01G171200.1 | Wheat | cytosol | 84.96 | 53.23 |
| Zm00001d032708_P009 | Maize | cytosol | 84.66 | 53.15 |
| Zm00001d014037_P004 | Maize | cytosol | 83.78 | 49.48 |
| KRH50907 | Soybean | cytosol | 20.06 | 14.26 |
| KRH02218 | Soybean | cytosol | 19.76 | 14.05 |
| KRG97048 | Soybean | nucleus | 0.0 | 0.0 |
| KRG92401 | Soybean | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.238.220 | MapMan:18.4.24.1.2.4 | UniProt:A0A0R0ET01 | EMBL:ACUP02012174 | InterPro:EF-hand-dom_pair |
| InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | EnsemblPlantsGene:GLYMA_19G2486001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:IPR002048 | EnsemblPlants:KRG97049 | ProteinID:KRG97049 | ProteinID:KRG97049.1 | PFAM:PF13499 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR14095 | PANTHER:PTHR14095:SF7 | SUPFAM:SSF47473 | UniParc:UPI0006ED7D0A | : |
Description
hypothetical protein
Coordinates
chr19:+:49487364..49491971
Molecular Weight (calculated)
40463.8 Da
IEP (calculated)
4.449
GRAVY (calculated)
-0.483
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: KAFIDYWING NMLTKDIATQ IYTTLKQPQL KYLTQDDFKP VLRELLANHP GLEFLQSTPE FQERYAETVI YRIYYYINRS GNGRLTLREL KRGNIIDAML
101: HADEEEDINK VLRYFSYEHF YVIYCKFWEL DTDHDFLIDK ENLIRYGNHA LTYRIVDRIF SQVPRRFTSK VEGKMGYEDF VYFILSEEDK SSEPSLEYWF
201: KCIDLDGNGV LTRNELQFFY EEQLHRMECM AQEPVLFEDI LCQIIDMIGP EDESYITLRD LKGGKLSGSV FNILFNLNKF MAFETRDPFL IRQERENPTL
301: TEWDRFAHRE YIRLSMEEDV EDASNGSAEV WDESLEAPF
101: HADEEEDINK VLRYFSYEHF YVIYCKFWEL DTDHDFLIDK ENLIRYGNHA LTYRIVDRIF SQVPRRFTSK VEGKMGYEDF VYFILSEEDK SSEPSLEYWF
201: KCIDLDGNGV LTRNELQFFY EEQLHRMECM AQEPVLFEDI LCQIIDMIGP EDESYITLRD LKGGKLSGSV FNILFNLNKF MAFETRDPFL IRQERENPTL
301: TEWDRFAHRE YIRLSMEEDV EDASNGSAEV WDESLEAPF
001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF
Arabidopsis Description
B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.