CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97049	Soybean	cytosol	85.0	60.18
GSMUA_Achr8P19010_001	Banana	cytosol	79.17	57.93
Bra021340.1-P	Field mustard	cytosol	95.0	42.22
CDY44814	Canola	cytosol	95.0	42.22
AT1G54450.1	Thale cress	cytosol	93.75	42.06
CDX86212	Canola	cytosol	87.5	39.03
CDY48668	Canola	cytosol	87.5	39.03
KRH34156	Soybean	cytosol	86.25	38.55
KRH68797	Soybean	cytosol	85.83	38.36
KRG92626	Soybean	cytosol	85.83	38.36
CDY57012	Canola	cytosol	85.0	37.99
CDY00020	Canola	cytosol	83.75	37.15
Solyc04g010070.2.1	Tomato	plastid	83.33	37.11
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	81.67	36.23
TraesCS1A01G153900.1	Wheat	cytosol	81.25	36.04
GSMUA_Achr11P...	Banana	cytosol	81.25	36.04
TraesCS1D01G152300.1	Wheat	cytosol	81.25	36.04
HORVU1Hr1G040980.1	Barley	cytosol	81.25	36.04
Solyc05g054980.2.1	Tomato	cytosol	80.83	35.99
EER94083	Sorghum	cytosol	80.83	35.86
TraesCS1B01G171200.1	Wheat	cytosol	80.83	35.86
GSMUA_AchrUn_...	Banana	cytosol	80.83	35.79
CDY36971	Canola	cytosol	78.75	35.66
CDY13127	Canola	cytosol	78.75	35.53
Zm00001d032708_P009	Maize	cytosol	79.58	35.37
CDX86655	Canola	cytosol	77.08	35.1
CDY15483	Canola	cytosol	77.08	34.64
Zm00001d014037_P004	Maize	cytosol	79.58	33.28
CDY13902	Canola	cytosol	22.92	12.3
CDX70827	Canola	nucleus	23.33	11.89
CDX92599	Canola	nucleus	23.33	11.67
CDY58103	Canola	nucleus	23.33	11.62
CDX88930	Canola	nucleus	23.33	11.43
CDY02615	Canola	nucleus	22.92	11.41
KRG97048	Soybean	nucleus	1.25	1.52

Protein Annotations

EnsemblPlants:CDY71370	EnsemblPlantsGene:GSBRNA2T00014396001	Gene3D:1.10.238.10	GO:A0A078JYA0	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR14095
PANTHER:PTHR14095:SF7	PFAM:PF13499	PFscan:PS50222	ProteinID:CDY71370	ProteinID:CDY71370.1	ScanProsite:PS00018
SUPFAM:SSF47473	UniParc:UPI0004EE2F52	UniProt:A0A078JYA0	MapMan:18.4.24.1.2.4	:	:

Description

BnaCnng72610DBnaCnng72610D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JYA0]

Coordinates

chrLK045556:+:3..1207

Molecular Weight (calculated)

28836.0 Da

IEP (calculated)

4.283

GRAVY (calculated)

-0.318

Length

240 amino acids

Sequence
(BLAST)

001: FTPFILTLYG LLIRYFSYEH FYVIYCKFWE LDTDHDFLID KENLIRYSNH ALTYRIVDRI FSQVPRKFTS KTEGKMCYED FVYFILAEED KSSEPSLEYW
101: FKCIDLDANG VLTRNELQFF YEEQLHRMEC MAQEAVLFED ILCQLFDMVK PEDEGYICLN DLKGSKLSGN VFNILFNLNK FMAFETRDPF LIRQERANPT
201: WTEWDRFAHR EYIRLSMEED VEDVSNGSAE AWDDSLEVSF

Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)

001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF

Arabidopsis Description

B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.