CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021340.1-P	Field mustard	cytosol	100.0	100.0
AT1G54450.1	Thale cress	cytosol	94.81	95.7
CDY71370	Canola	extracellular	42.22	95.0
KRG97049	Soybean	cytosol	55.56	88.5
GSMUA_Achr8P19010_001	Banana	cytosol	51.3	84.45
KRH68797	Soybean	cytosol	77.96	78.4
KRG92626	Soybean	cytosol	77.04	77.47
KRH34156	Soybean	cytosol	76.85	77.28
CDY48668	Canola	cytosol	76.67	76.95
CDX86212	Canola	cytosol	76.67	76.95
CDY57012	Canola	cytosol	73.7	74.12
Solyc04g010070.2.1	Tomato	plastid	73.33	73.47
CDY00020	Canola	cytosol	73.15	73.01
GSMUA_Achr11P...	Banana	cytosol	73.15	73.01
Solyc05g054980.2.1	Tomato	cytosol	72.59	72.73
GSMUA_AchrUn_...	Banana	cytosol	72.04	71.77
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	71.48	71.35
TraesCS1A01G153900.1	Wheat	cytosol	70.74	70.61
EER94083	Sorghum	cytosol	70.56	70.43
TraesCS1B01G171200.1	Wheat	cytosol	70.56	70.43
TraesCS1D01G152300.1	Wheat	cytosol	70.56	70.43
HORVU1Hr1G040980.1	Barley	cytosol	70.56	70.43
Zm00001d032708_P009	Maize	cytosol	69.81	69.81
CDY13127	Canola	cytosol	66.11	67.11
CDY36971	Canola	cytosol	65.37	66.6
Zm00001d014037_P004	Maize	cytosol	69.81	65.68
CDX86655	Canola	cytosol	63.89	65.46
CDY15483	Canola	cytosol	63.33	64.04
KRG97048	Soybean	nucleus	22.22	60.91
CDY13902	Canola	cytosol	17.04	20.58
CDX92599	Canola	nucleus	17.59	19.79
CDX70827	Canola	nucleus	17.22	19.75
CDY58103	Canola	nucleus	17.59	19.71
CDY02615	Canola	nucleus	17.41	19.5
CDX88930	Canola	nucleus	17.41	19.18

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	MapMan:18.4.24.1.2.4	GO:A0A078I5U6	UniProt:A0A078I5U6
EnsemblPlants:CDY44814	ProteinID:CDY44814	ProteinID:CDY44814.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00080831001	InterPro:IPR002048	PFAM:PF13499
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7	SUPFAM:SSF47473	UniParc:UPI0002545064
SEG:seg	:	:	:	:	:

Description

BnaCnng11700DProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:Projected from Arabidopsis thaliana (AT1G54450) UniProtKB/Swiss-Prot;Acc:Q9SLI8]

Coordinates

chrLK032602:+:42920..46295

Molecular Weight (calculated)

62540.0 Da

IEP (calculated)

4.780

GRAVY (calculated)

-0.431

Length

540 amino acids

Sequence
(BLAST)

001: MAQSKAMESL TLDIELLQLP ETSPMSMKSN QDFVKKLFDQ WLALPETNRL VASLVNDVKS GVALNVVSGG SSATNSGSNS PLASMFPARN GPPLSPRNST
101: GSPRITRQRT GLSNLSSPLK VVSDHVKELI PQFYFEDGRP PPNDQKEQCI AKINTLFHGH EDGLQLQEFK LVTSEICKVP SFFSTSIFRK VDTNNTGFVK
201: REAFIDYWVK GNMLTKEIAT QIFTILKQPD KKYLVQDDFK PVLQELLATH PGLEFLQGTP EFQDRYAETV IYRIYYYINR SGNGHLTLRE LKRGNLVDAM
301: QHADEEEDIN KVLRYFSYEH FYVIYCKFWE LDTDHDFLID KENLIRYSNH ALTYRIVDRI FSQVPRKFTS KTEGKMCYED FVYFILAEED KSSEPSLEYW
401: FKCIDLDANG VLTRNELQFF YEEQLHRMEC MAQEAVLFED ILCQLFDMVK PEDEGYICLN DLKGSKLSGN VFNILFNLNK FMAFETRDPF LIRQERANPT
501: WTEWDRFAHR EYIRLSMEED VEDASNGSAE AWDDSLEVSF

Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)

001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF

Arabidopsis Description

B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.