Factsheet for AT1G54450.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021340.1-P	Field mustard	cytosol	95.7	94.81
CDY44814	Canola	cytosol	95.7	94.81
CDY71370	Canola	extracellular	42.06	93.75
KRG97049	Soybean	cytosol	55.33	87.32
GSMUA_Achr8P19010_001	Banana	cytosol	51.22	83.54
KRG92626	Soybean	cytosol	78.32	78.03
KRH68797	Soybean	cytosol	77.94	77.65
KRH34156	Soybean	cytosol	77.57	77.28
AT5G28850.2	Thale cress	cytosol	75.89	75.75
AT5G28900.1	Thale cress	cytosol	75.51	75.37
Solyc04g010070.2.1	Tomato	plastid	74.21	73.65
Solyc05g054980.2.1	Tomato	cytosol	72.9	72.36
GSMUA_Achr11P...	Banana	cytosol	72.52	71.72
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	72.34	71.53
GSMUA_AchrUn_...	Banana	cytosol	72.34	71.4
HORVU1Hr1G040980.1	Barley	cytosol	71.22	70.43
EER94083	Sorghum	cytosol	71.22	70.43
TraesCS1A01G153900.1	Wheat	cytosol	71.03	70.24
TraesCS1B01G171200.1	Wheat	cytosol	70.84	70.06
TraesCS1D01G152300.1	Wheat	cytosol	70.84	70.06
Zm00001d032708_P009	Maize	cytosol	70.47	69.81
Zm00001d014037_P004	Maize	cytosol	70.47	65.68
AT1G03960.1	Thale cress	cytosol	64.49	65.22
KRG97048	Soybean	nucleus	22.24	60.41
AT5G44090.2	Thale cress	endoplasmic reticulum, extracellular	64.49	60.21
AT5G18580.1	Thale cress	nucleus	17.76	19.79

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	MapMan:18.4.24.1.2.4	EntrezGene:841887	ProteinID:AAD25624.1
ProteinID:AEE33105.1	ArrayExpress:AT1G54450	EnsemblPlantsGene:AT1G54450	RefSeq:AT1G54450	TAIR:AT1G54450	RefSeq:AT1G54450-TAIR-G
EnsemblPlants:AT1G54450.1	TAIR:AT1G54450.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0046872	InterPro:IPR002048	RefSeq:NP_175847.1
PFAM:PF13499	PFAM:PF13833	PO:PO:0000005	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0007611	PO:PO:0007616	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR14095	PANTHER:PTHR14095:SF7	UniProt:Q9SLI8	SUPFAM:SSF47473	UniParc:UPI000009D9A9	SEG:seg

Description

B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]

Coordinates

chr1:-:20336203..20339769

Molecular Weight (calculated)

61942.3 Da

IEP (calculated)

4.638

GRAVY (calculated)

-0.425

Length

535 amino acids

Sequence
(BLAST)

001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.