Factsheet for AT5G44090.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
cytosol 1
nucleus 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36971	Canola	cytosol	79.41	85.85
CDY13127	Canola	cytosol	79.58	85.71
Bra027527.1-P	Field mustard	cytosol	79.41	85.37
GSMUA_Achr8P19010_001	Banana	cytosol	46.42	81.1
AT1G03960.1	Thale cress	cytosol	73.12	79.21
KRH62662	Soybean	cytosol	6.98	75.47
VIT_07s0005g03730.t01	Wine grape	cytosol	66.32	69.47
Zm00001d032708_P009	Maize	cytosol	63.18	67.04
EER94083	Sorghum	cytosol	63.0	66.73
GSMUA_Achr11P...	Banana	cytosol	62.65	66.36
HORVU1Hr1G040980.1	Barley	cytosol	62.65	66.36
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	62.48	66.17
TraesCS1A01G153900.1	Wheat	cytosol	62.48	66.17
TraesCS1D01G152300.1	Wheat	cytosol	62.3	65.99
TraesCS1B01G171200.1	Wheat	cytosol	62.13	65.8
AT5G28900.1	Thale cress	cytosol	61.26	65.49
AT5G28850.2	Thale cress	cytosol	61.26	65.49
GSMUA_AchrUn_...	Banana	cytosol	61.43	64.94
AT1G54450.1	Thale cress	cytosol	60.21	64.49
Zm00001d014037_P004	Maize	cytosol	63.0	62.89
AT5G18580.1	Thale cress	nucleus	17.1	20.42

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	MapMan:18.4.24.1.2.4	EntrezGene:834432	UniProt:A0A1P8BH17
ProteinID:ANM70902.1	ArrayExpress:AT5G44090	EnsemblPlantsGene:AT5G44090	RefSeq:AT5G44090	TAIR:AT5G44090	RefSeq:AT5G44090-TAIR-G
EnsemblPlants:AT5G44090.2	Unigene:At.8707	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	RefSeq:NP_001332476.1	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7	SUPFAM:SSF47473	UniParc:UPI000848C19C	SEG:seg

Description

Calcium-binding EF-hand family protein [Source:TAIR;Acc:AT5G44090]

Coordinates

chr5:-:17742766..17748525

Molecular Weight (calculated)

66445.5 Da

IEP (calculated)

5.244

GRAVY (calculated)

-0.287

Length

573 amino acids

Sequence
(BLAST)

001: MLIALTESSA VAYLVVLFIS YRFYLVLDKE CLNSTFRGYN DLGDNSTGIL QGSAKLEKCL YLCSTRFNLK LLRIWSSVVC RLPTHVKSLI DDTKSSTPVS
101: VSKNCTSLNV ACGSALPSVF LNSGTPPLSP RGSPGSPRFS RQKTSPSLQS PLKSVREPKR QLIPQFYFQH GRPPAKELRE QCISMVDQFF SNYIDGLHMD
201: EFKSITKEVC KLPSFLSSVL FRKIDTSGTG IVTRDAFIKY WVDGHMLAMD VASQIYNILR QPGCKYLRQA DFKPVLDELL TTHPGLEFLR NTPEFQERYA
301: ETVIYRIFYY INRSGTGCIT LRELKRGNLI TAMQQVDEED DINKVIRYFS YEHFYVIYCR FWELDGDHDF LIDKENLIKY GNHALTYRIV DRIFSQVPRK
401: FTSKVEGKMS YEDFAYFILA EEDKSSEPSL EYWFKCIDLD GDGVITPNEM QFFYEEQLHR MECITQEPVL FEDILCQIFD MIKPEKENCI TLQDLKASKL
501: SGNIFNILFN LNKFMAFETR DPFLIRQERE NPTLTEWDRF AQREYVRLSM EEDVEEVSNG SADVWDEPLE SPF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.