Factsheet for Bra027527.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13127	Canola	cytosol	98.69	98.87
Bra030551.1-P	Field mustard	cytosol	79.92	79.48
AT5G44090.2	Thale cress	endoplasmic reticulum, extracellular	85.37	79.41
GSMUA_Achr8P19010_001	Banana	cytosol	48.78	79.27
VIT_07s0005g03730.t01	Wine grape	cytosol	73.92	72.03
KRH62662	Soybean	cytosol	7.13	71.7
GSMUA_Achr11P...	Banana	cytosol	70.54	69.5
Zm00001d032708_P009	Maize	cytosol	69.79	68.89
EER94083	Sorghum	cytosol	69.61	68.58
HORVU1Hr1G040980.1	Barley	cytosol	69.42	68.39
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	69.42	68.39
TraesCS1D01G152300.1	Wheat	cytosol	69.42	68.39
GSMUA_AchrUn_...	Banana	cytosol	69.42	68.27
TraesCS1A01G153900.1	Wheat	cytosol	69.23	68.21
TraesCS1B01G171200.1	Wheat	cytosol	68.86	67.84
Bra010012.1-P	Field mustard	cytosol	67.73	67.1
Bra021340.1-P	Field mustard	cytosol	66.79	65.93
Bra036126.1-P	Field mustard	cytosol	64.92	64.43
Zm00001d014037_P004	Maize	cytosol	68.86	63.94
Bra002169.1-P	Field mustard	nucleus	18.01	20.0
Bra023686.1-P	Field mustard	nucleus	18.01	19.92

Protein Annotations

EnsemblPlants:Bra027527.1	EnsemblPlants:Bra027527.1-P	EnsemblPlantsGene:Bra027527	Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
InterPro:IPR002048	PANTHER:PTHR14095	PANTHER:PTHR14095:SF7	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018
SUPFAM:SSF47473	UniParc:UPI00025427D1	UniProt:M4EFG5	MapMan:18.4.24.1.2.4	:	:

Description

AT5G44090 (E=7e-287) | calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative

Coordinates

chrA09:+:13577135..13580748

Molecular Weight (calculated)

61901.8 Da

IEP (calculated)

4.781

GRAVY (calculated)

-0.340

Length

533 amino acids

Sequence
(BLAST)

001: MDIEEVHILD PELLQLPGLS VKSNPLIAEE LFSHWLSLPD TSRLVKSLID DTKSSTPVSI SKNCANLNIA CGSALPSLFL NSGTPPLSPR ASSGSPRFSR
101: QKTSPFSLQS PLRSLREPKP QLIPQFYFQH GPPPAKELKE QCLSMVDHLF SDFIDGLRMN EFKTVTKEVC KLPSFLSSVL FRKIDVDSTG IVTRDAFIKY
201: WVDGHMLAMD LASQIYNILR QPGCEYLRQA DFKPVLDELL ASHPGLEFLR NTPEFQERYA ETVIYRIFYY INRSGTGCIT LRELKRGNLV AAMQQVDEED
301: DINKVIRYFS YEHFYVIYCR FWELDGDHDF LIDKENLLKY GNHALTYRIV DRIFSQVPRK FTSKVEGKMS YEDFAYFILA EEDKSSEPSL EYWFKCIDLD
401: GDGVISPNEM QFFYEEQLHR MECITQEPVL FEDILCQIFD MIKPEARKEN CITLKDLKAS KLSRNVFNIL FNLNKFMAFE TRDPFLIRQE RENPTLTEWD
501: RFAQREYVRL SMEEDEVSNG SADVWDEPLE SPF

Best Arabidopsis Sequence Match ( AT5G44090.1 )
(BLAST)

001: MEIDGGNDVQ ILDPELLQLP GLSPVSLKEN PHIAEELFSQ WLSLPETGRL VKSLIDDTKS STPVSVSKNC TSLNVACGSA LPSVFLNSGT PPLSPRGSPG
101: SPRFSRQKTS PSLQSPLKSV REPKRQLIPQ FYFQHGRPPA KELREQCISM VDQFFSNYID GLHMDEFKSI TKEVCKLPSF LSSVLFRKID TSGTGIVTRD
201: AFIKYWVDGH MLAMDVASQI YNILRQPGCK YLRQADFKPV LDELLTTHPG LEFLRNTPEF QERYAETVIY RIFYYINRSG TGCITLRELK RGNLITAMQQ
301: VDEEDDINKV IRYFSYEHFY VIYCRFWELD GDHDFLIDKE NLIKYGNHAL TYRIVDRIFS QVPRKFTSKV EGKMSYEDFA YFILAEEDKS SEPSLEYWFK
401: CIDLDGDGVI TPNEMQFFYE EQLHRMECIT QEPVLFEDIL CQIFDMIKPE KENCITLQDL KASKLSGNIF NILFNLNKFM AFETRDPFLI RQERENPTLT
501: EWDRFAQREY VRLSMEEDVE EVSNGSADVW DEPLESPF

Arabidopsis Description

Calcium-binding EF-hand family protein [Source:TAIR;Acc:AT5G44090]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.