Factsheet for Bra002169.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008613.1-P
Bra023570.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G18580.1	Bra008613.1-P	AT5G16560.1	21798944
AT5G18580.1	Bra023570.1-P	AT5G16560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92599	Canola	nucleus	99.79	99.79
Bra023686.1-P	Field mustard	nucleus	90.0	89.63
AT5G18580.1	Thale cress	nucleus	88.33	88.33
Solyc01g067500.2.1	Tomato	cytosol	84.58	84.94
KRH02218	Soybean	cytosol	84.17	84.7
VIT_05s0020g01710.t01	Wine grape	cytosol	83.54	84.24
KRH50907	Soybean	cytosol	82.71	83.23
TraesCS1D01G098600.1	Wheat	cytosol, plastid	82.29	81.28
TraesCS1B01G118200.1	Wheat	cytosol, plastid	82.29	81.28
TraesCS1A01G090100.1	Wheat	cytosol, plastid	82.29	81.28
EES17718	Sorghum	nucleus, plastid	82.5	80.82
GSMUA_Achr1P14730_001	Banana	cytosol	81.88	80.53
Zm00001d010862_P002	Maize	nucleus, plastid	80.62	78.5
Zm00001d024857_P002	Maize	cytosol	80.21	77.0
GSMUA_Achr9P20260_001	Banana	cytosol, mitochondrion	17.29	64.34
GSMUA_Achr9P20250_001	Banana	extracellular, golgi	35.0	53.67
Bra010012.1-P	Field mustard	cytosol	21.04	18.77
Bra030551.1-P	Field mustard	cytosol	20.42	18.28
Bra027527.1-P	Field mustard	cytosol	20.0	18.01
Bra036126.1-P	Field mustard	cytosol	19.79	17.69
Bra021340.1-P	Field mustard	cytosol	19.79	17.59

Protein Annotations

EnsemblPlants:Bra002169.1	EnsemblPlants:Bra002169.1-P	EnsemblPlantsGene:Bra002169	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	ncoils:Coil
PANTHER:PTHR12085	PANTHER:PTHR12085:SF3	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg
SUPFAM:SSF47473	UniParc:UPI000254376C	UniProt:M4CD88	MapMan:13.4.1.2.5	MapMan:18.4.24.1.2.4	:

Description

AT5G18580 (E=1e-234) FASS, TON2, EMB40, FS1, GDO, FASS 2 | FASS (FASS 1); protein phosphatase type 2B regulator

Coordinates

chrA10:-:11112602..11115438

Molecular Weight (calculated)

55249.6 Da

IEP (calculated)

4.824

GRAVY (calculated)

-0.493

Length

480 amino acids

Sequence
(BLAST)

001: MHSGSSGGES HDTPTHKKIP PASSMLWVRN LRRYIGSGAG LGSEALMELE IKRILFEIFK EKQLKSQESG TIPSFYKKKP EEGSISQRVQ KLAKYRFLKK
101: QSDLLLNSDD LDALWNCLRE NCVIDDATGA EKMNYEDFCH IASVCTEQIG PKCRQFFSPS NFMKFEKDDA GRIAILPFYL YVLRTVSLTQ ARIDMSEHDQ
201: DSDGFLQSHE MESYIMGLIP NLAQLRDMLE TFRQTYCRIA AQKFFFFCDP HRRGKACIKK ILLSNCLQEL MELHQESEEE VTETEQAENW FSLTSAQRVC
301: DMFLALDKDA SGSLSKQELK EYADGTLTEI FIERVFDEHV RRGKSSRVNS REMDFDSFLD FVLALENKDT PEGLTYLFRC LDLQGRGFLT TADIHSLFRD
401: VHKKWIEGGN YELCIEDVRD EIWDMVKPSD PLKITLNDLL GCKQGGTVAS MLIDVRGFWA HDNRENLLQE EEEPPEEESQ

Best Arabidopsis Sequence Match ( AT5G18580.1 )
(BLAST)

001: MYSGSSDGES HDTSTQRKIP PASSMLWVRN LRRYIGSGAG LGSEALMELE TKRILLEIFK EKQQKSQEAG TIPSFYKKKP EEGSISQRVQ KLAKYRFLKK
101: QSDLLLNADD LAAMWVCLRE NCVIDDATGA EKMNYEDFCH IASVCTEQIG PKCRRFFSPS NFMKFEKDEA GRIAILPFYL YVMRTVSLTQ ARIDMSELDE
201: DSDGFLHSDE MESYIGGLIP NLAQLRDMPP AFNQMYCRIA SQKFFFFCDP HRRGRACIKK ILLSNCLQEL MELHQESEEE VTDTEQAENW FSLTSAQRIC
301: DMFLALDKDM SGSLCKQELK EYADGTLTEI FIERVFDEHV RRGKIVAGNS REMDFDSFLD FVLALENKDT PEGLTYLFRC LDLQGRGFLT TADIHSLFRD
401: VHQKWIEGGN YELCIEDVRD EIWDMVKPSD PLKITLGDLL GCKQGGTVAS MLIDVRGFWA HDNRENLLQE EEEPPEEESQ

Arabidopsis Description

TON2Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FEE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.