CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG25180

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G18580.1	KXG25180	AT5G16560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010862_P002	Maize	nucleus, plastid	95.1	94.52
TraesCS1D01G098600.1	Wheat	cytosol, plastid	93.47	94.24
TraesCS1B01G118200.1	Wheat	cytosol, plastid	93.47	94.24
TraesCS1A01G090100.1	Wheat	cytosol, plastid	93.47	94.24
VIT_05s0020g01710.t01	Wine grape	cytosol	87.55	90.13
Solyc01g067500.2.1	Tomato	cytosol	87.76	89.96
Zm00001d024857_P002	Maize	cytosol	91.22	89.4
GSMUA_Achr1P14730_001	Banana	cytosol	87.76	88.11
KRH50907	Soybean	cytosol	85.1	87.42
CDY02615	Canola	nucleus	84.9	86.31
KRH02218	Soybean	cytosol	83.88	86.16
AT5G18580.1	Thale cress	nucleus	84.29	86.04
CDY58103	Canola	nucleus	83.67	85.06
Bra023686.1-P	Field mustard	nucleus	83.67	85.06
CDX70827	Canola	nucleus	81.22	84.5
CDX88930	Canola	nucleus	83.67	83.67
CDX92599	Canola	nucleus	80.82	82.5
Bra002169.1-P	Field mustard	nucleus	80.82	82.5
CDY13902	Canola	cytosol	69.8	76.51
GSMUA_Achr9P20260_001	Banana	cytosol, mitochondrion	18.37	69.77
GSMUA_Achr9P20250_001	Banana	extracellular, golgi	36.94	57.83
EER94083	Sorghum	cytosol	21.22	19.22
EES06429	Sorghum	cytosol	19.59	17.68

Protein Annotations

Gene3D:1.10.238.10	MapMan:13.4.1.2.5	MapMan:18.4.24.1.2.4	EntrezGene:8069499	UniProt:C5Z042	ncoils:Coil
EnsemblPlants:EES17718	ProteinID:EES17718	ProteinID:EES17718.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0000226	GO:GO:0000913	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005819	GO:GO:0005856
GO:GO:0007049	GO:GO:0008150	GO:GO:0009524	GO:GO:0009987	GO:GO:0016043	GO:GO:0030865
InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR12085	PANTHER:PTHR12085:SF3
EnsemblPlantsGene:SORBI_3009G044900	SUPFAM:SSF47473	unigene:Sbi.12823	UniParc:UPI0001A88769	RefSeq:XP_002439288.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:4283191..4288407

Molecular Weight (calculated)

55543.0 Da

IEP (calculated)

4.704

GRAVY (calculated)

-0.386

Length

490 amino acids

Sequence
(BLAST)

001: MSTASGDGAD AGGDGASSAA AGASAPAGRR IPPASSMPWV RNLRRFVGTG AGLGSEALME LETKRILLEI FKERQRKSAE AGSIPSFYKK KPEEGSISSR
101: VQRLAKYRFL KKQSELLLNA DDLDAMWVCL RENCVIDDAT GAEKMNYEDF CHIATVCTEQ IGQKCKRFFS PSNFMKFEKD DSGRIAILPF YLYVMRTVSL
201: TQARIDMSEL DEDSDGFLQP HEMEAYIRGL IPNLAQLRDM PTAFVQMYCR IAARKFFFFC DPHRRGKACI KKVLLSNCLQ ELMELHQESE EEVTDTEQAE
301: NWFSLTSAQR ICDMFLALDK DTNGTLSKQE LKEYADGTLT EIFIERVFDE HVRRSKVGGG NSREMDFESF LDFVLALENK DTPEGLTYLF RCLDLNGRGF
401: LTTADIHTLF RDVHQKWIEG GNYELCIEDV RDEIWDMVKP ADPLRISLPD LLSCKQGGTI ASMLIDVRGF WAHDNRENLL QEEEEQVEEA

Best Arabidopsis Sequence Match ( AT5G18580.1 )
(BLAST)

001: MYSGSSDGES HDTSTQRKIP PASSMLWVRN LRRYIGSGAG LGSEALMELE TKRILLEIFK EKQQKSQEAG TIPSFYKKKP EEGSISQRVQ KLAKYRFLKK
101: QSDLLLNADD LAAMWVCLRE NCVIDDATGA EKMNYEDFCH IASVCTEQIG PKCRRFFSPS NFMKFEKDEA GRIAILPFYL YVMRTVSLTQ ARIDMSELDE
201: DSDGFLHSDE MESYIGGLIP NLAQLRDMPP AFNQMYCRIA SQKFFFFCDP HRRGRACIKK ILLSNCLQEL MELHQESEEE VTDTEQAENW FSLTSAQRIC
301: DMFLALDKDM SGSLCKQELK EYADGTLTEI FIERVFDEHV RRGKIVAGNS REMDFDSFLD FVLALENKDT PEGLTYLFRC LDLQGRGFLT TADIHSLFRD
401: VHQKWIEGGN YELCIEDVRD EIWDMVKPSD PLKITLGDLL GCKQGGTVAS MLIDVRGFWA HDNRENLLQE EEEPPEEESQ

Arabidopsis Description

TON2Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FEE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.