Factsheet for GSMUA_Achr9P20250_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 3
plastid 1
nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P04510_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G18580.1	GSMUA_Achr4P04510_001	AT5G16560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g01710.t01	Wine grape	cytosol	59.42	39.08
GSMUA_Achr1P14730_001	Banana	cytosol	60.38	38.73
Solyc01g067500.2.1	Tomato	cytosol	58.47	38.28
KRH50907	Soybean	cytosol	56.87	37.32
TraesCS1A01G090100.1	Wheat	cytosol, plastid	57.83	37.24
TraesCS1B01G118200.1	Wheat	cytosol, plastid	57.83	37.24
TraesCS1D01G098600.1	Wheat	cytosol, plastid	57.83	37.24
EES17718	Sorghum	nucleus, plastid	57.83	36.94
CDX70827	Canola	nucleus	54.95	36.52
CDY02615	Canola	nucleus	56.23	36.51
AT5G18580.1	Thale cress	nucleus	55.91	36.46
KRH02218	Soybean	cytosol	55.27	36.27
CDY13902	Canola	cytosol	51.76	36.24
CDY58103	Canola	nucleus	54.95	35.68
Bra023686.1-P	Field mustard	nucleus	54.95	35.68
CDX88930	Canola	nucleus	55.59	35.51
Zm00001d010862_P002	Maize	nucleus, plastid	55.91	35.5
Zm00001d024857_P002	Maize	cytosol	56.23	35.2
Bra002169.1-P	Field mustard	nucleus	53.67	35.0
CDX92599	Canola	nucleus	53.67	35.0
GSMUA_Achr8P19010_001	Banana	cytosol	20.13	19.21
GSMUA_Achr11P...	Banana	cytosol	23.0	13.31
GSMUA_AchrUn_...	Banana	cytosol	22.68	13.1
GSMUA_Achr8P19030_001	Banana	cytosol	3.51	5.05
GSMUA_Achr9P20260_001	Banana	cytosol, mitochondrion	0.96	2.33

Protein Annotations

Gene3D:1.10.238.10	MapMan:13.4.1.2.5	MapMan:18.4.24.1.2.4	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr9G20250_001	EnsemblPlants:GSMUA_Achr9P20250_001	EnsemblPlants:GSMUA_Achr9T20250_001	InterPro:IPR002048	UniProt:M0U1Y4
PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR12085	PANTHER:PTHR12085:SF3	SUPFAM:SSF47473
TMHMM:TMhelix	UniParc:UPI000296073B	SEG:seg	:	:	:

Description

Putative Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma [Source:GMGC_GENE;Acc:GSMUA_Achr9G20250_001]

Coordinates

chr9:-:23758827..23768780

Molecular Weight (calculated)

36579.3 Da

IEP (calculated)

4.693

GRAVY (calculated)

-0.134

Length

313 amino acids

Sequence
(BLAST)

001: MKFEKDESGR TTLPFYLYVM RTVLSIFLLS GILSFFIQGF LQKTSDEIEH YILRDLLLFL LEKKYMSTNY IDVIRYMYEI KFFIFCIGKD RGRSNKMLLE
101: NLDKYLTVLN LALCRLNDGK RPCGRPQMIE VLRVVGYMFL ALDKDHNGTI SKQDLKEYAD GTLTEIFIER VFDEHVRWSK TGGGNAREMD FESFLDFVLA
201: LENKVTPEGL TYIFKSLDLQ GRGYLTTAEI YTLFRDVHQK WIEGGHYDLC IEDVRDEIWD MVKPVDPLRI TLADLLACKQ GGTVAGMFMD VCGFWAHDNR
301: ENLLLEEEEL EEE

Best Arabidopsis Sequence Match ( AT5G18580.1 )
(BLAST)

001: MYSGSSDGES HDTSTQRKIP PASSMLWVRN LRRYIGSGAG LGSEALMELE TKRILLEIFK EKQQKSQEAG TIPSFYKKKP EEGSISQRVQ KLAKYRFLKK
101: QSDLLLNADD LAAMWVCLRE NCVIDDATGA EKMNYEDFCH IASVCTEQIG PKCRRFFSPS NFMKFEKDEA GRIAILPFYL YVMRTVSLTQ ARIDMSELDE
201: DSDGFLHSDE MESYIGGLIP NLAQLRDMPP AFNQMYCRIA SQKFFFFCDP HRRGRACIKK ILLSNCLQEL MELHQESEEE VTDTEQAENW FSLTSAQRIC
301: DMFLALDKDM SGSLCKQELK EYADGTLTEI FIERVFDEHV RRGKIVAGNS REMDFDSFLD FVLALENKDT PEGLTYLFRC LDLQGRGFLT TADIHSLFRD
401: VHQKWIEGGN YELCIEDVRD EIWDMVKPSD PLKITLGDLL GCKQGGTVAS MLIDVRGFWA HDNRENLLQE EEEPPEEESQ

Arabidopsis Description

TON2Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FEE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.