Factsheet for GSMUA_Achr1P14730_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P04510_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G18580.1	GSMUA_Achr4P04510_001	AT5G16560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g01710.t01	Wine grape	cytosol	89.96	92.23
Solyc01g067500.2.1	Tomato	cytosol	89.75	91.63
KRH50907	Soybean	cytosol	87.7	89.73
KRH02218	Soybean	cytosol	86.27	88.26
TraesCS1A01G090100.1	Wheat	cytosol, plastid	87.5	87.86
TraesCS1B01G118200.1	Wheat	cytosol, plastid	87.5	87.86
TraesCS1D01G098600.1	Wheat	cytosol, plastid	87.5	87.86
EES17718	Sorghum	nucleus, plastid	88.11	87.76
CDY02615	Canola	nucleus	86.07	87.14
AT5G18580.1	Thale cress	nucleus	85.66	87.08
Zm00001d010862_P002	Maize	nucleus, plastid	86.68	85.8
CDY58103	Canola	nucleus	84.43	85.48
Bra023686.1-P	Field mustard	nucleus	84.43	85.48
CDX70827	Canola	nucleus	81.76	84.71
CDX88930	Canola	nucleus	84.43	84.08
Zm00001d024857_P002	Maize	cytosol	85.45	83.4
Bra002169.1-P	Field mustard	nucleus	80.53	81.88
CDX92599	Canola	nucleus	80.53	81.88
CDY13902	Canola	cytosol	69.88	76.29
GSMUA_Achr9P20260_001	Banana	cytosol, mitochondrion	19.06	72.09
GSMUA_Achr9P20250_001	Banana	extracellular, golgi	38.73	60.38
GSMUA_Achr8P19010_001	Banana	cytosol	13.52	20.12
GSMUA_AchrUn_...	Banana	cytosol	21.72	19.56
GSMUA_Achr11P...	Banana	cytosol	21.11	19.04
GSMUA_Achr8P19030_001	Banana	cytosol	6.76	15.14

Protein Annotations

Gene3D:1.10.238.10	MapMan:13.4.1.2.5	MapMan:18.4.24.1.2.4	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000226	GO:GO:0000913	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005819
GO:GO:0005856	GO:GO:0007049	GO:GO:0008150	GO:GO:0009524	GO:GO:0009987	GO:GO:0016043
GO:GO:0030865	EnsemblPlantsGene:GSMUA_Achr1G14730_001	EnsemblPlants:GSMUA_Achr1P14730_001	EnsemblPlants:GSMUA_Achr1T14730_001	InterPro:IPR002048	UniProt:M0RZY1
PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR12085	PANTHER:PTHR12085:SF3	SUPFAM:SSF47473
UniParc:UPI0002955F15	SEG:seg	:	:	:	:

Description

Putative Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma [Source:GMGC_GENE;Acc:GSMUA_Achr1G14730_001]

Coordinates

chr1:-:11134355..11147474

Molecular Weight (calculated)

55815.6 Da

IEP (calculated)

4.752

GRAVY (calculated)

-0.406

Length

488 amino acids

Sequence
(BLAST)

001: MYSGSSDGEG SGGHEAAAAP KKIPSASSMP WVRNLRRFVG SGAGLGSEAL MELETKRILL EIFKERQQKN AQAGLIPSFY KKASLLMVQK PEEGSISHRV
101: QRLAKYRFLK KQSELLLNAD DLDAMWVCLR ENCVIDDATG AEKMNYEDFC HIASLCTEQI GPKCRRFFSP SNFMKFEKDE SGRIAILPFY LYVMRTVSLT
201: QARIDMSELD EDSDGFLQPH EMEAYIRGLI PNLAQLRDMP AAFVQMYCRI AVRKFFFFCD PHRRGKADIK KVLLSNCLQE LMELHQESEE EVTDTEQAEN
301: WFSLTSAQRI CDMFLALDKD KNGTLSKQEL KEYADGTLTE IFIERVFDEH VRRSKTGGGN SREMDFESFL DFVLALENKD APEGLTYLFR CLDLQGRGYL
401: TTADVHTLFR DVHQKWIEGG NYELCIEDVR DEIWDMVKPV DPLRVTLADL LACKQGGTVA SMLIDVRGFW AHDNRENLLQ EEEEPEEE

Best Arabidopsis Sequence Match ( AT5G18580.1 )
(BLAST)

001: MYSGSSDGES HDTSTQRKIP PASSMLWVRN LRRYIGSGAG LGSEALMELE TKRILLEIFK EKQQKSQEAG TIPSFYKKKP EEGSISQRVQ KLAKYRFLKK
101: QSDLLLNADD LAAMWVCLRE NCVIDDATGA EKMNYEDFCH IASVCTEQIG PKCRRFFSPS NFMKFEKDEA GRIAILPFYL YVMRTVSLTQ ARIDMSELDE
201: DSDGFLHSDE MESYIGGLIP NLAQLRDMPP AFNQMYCRIA SQKFFFFCDP HRRGRACIKK ILLSNCLQEL MELHQESEEE VTDTEQAENW FSLTSAQRIC
301: DMFLALDKDM SGSLCKQELK EYADGTLTEI FIERVFDEHV RRGKIVAGNS REMDFDSFLD FVLALENKDT PEGLTYLFRC LDLQGRGFLT TADIHSLFRD
401: VHQKWIEGGN YELCIEDVRD EIWDMVKPSD PLKITLGDLL GCKQGGTVAS MLIDVRGFWA HDNRENLLQE EEEPPEEESQ

Arabidopsis Description

TON2Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FEE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.