CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH39002
KRH48713

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G18580.1	KRH39002	AT5G16560.1	21798944
AT5G18580.1	KRH48713	AT5G16560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50907	Soybean	cytosol	97.9	97.9
VIT_05s0020g01710.t01	Wine grape	cytosol	92.03	92.23
Solyc01g067500.2.1	Tomato	cytosol	90.99	90.8
CDY02615	Canola	nucleus	88.05	87.14
AT5G18580.1	Thale cress	nucleus	87.63	87.08
Bra023686.1-P	Field mustard	nucleus	87.63	86.72
CDY58103	Canola	nucleus	87.63	86.72
GSMUA_Achr1P14730_001	Banana	cytosol	88.26	86.27
CDX70827	Canola	nucleus	84.91	85.99
CDX88930	Canola	nucleus	87.21	84.9
TraesCS1A01G090100.1	Wheat	cytosol, plastid	85.95	84.36
TraesCS1B01G118200.1	Wheat	cytosol, plastid	85.95	84.36
TraesCS1D01G098600.1	Wheat	cytosol, plastid	85.95	84.36
Bra002169.1-P	Field mustard	nucleus	84.7	84.17
CDX92599	Canola	nucleus	84.7	84.17
EES17718	Sorghum	nucleus, plastid	86.16	83.88
Zm00001d010862_P002	Maize	nucleus, plastid	84.28	81.54
Zm00001d024857_P002	Maize	cytosol	83.65	79.8
CDY13902	Canola	cytosol	71.91	76.73
GSMUA_Achr9P20260_001	Banana	cytosol, mitochondrion	17.4	64.34
GSMUA_Achr9P20250_001	Banana	extracellular, golgi	36.27	55.27
KRG92395	Soybean	cytosol	4.82	27.06
KRG97049	Soybean	cytosol	14.05	19.76
KRG92626	Soybean	cytosol	20.55	18.25
KRH34156	Soybean	cytosol	20.34	18.06
KRH34399	Soybean	cytosol	19.71	17.38
KRH68797	Soybean	cytosol	19.29	17.13
KRG92392	Soybean	cytosol	4.19	17.09
KRG92396	Soybean	cytosol	2.73	16.88
KRG92401	Soybean	cytosol, plastid	4.82	14.56
KRG97048	Soybean	nucleus	5.66	13.71
KRG92399	Soybean	cytosol	0.63	9.09
KRH62662	Soybean	cytosol	0.84	7.55

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100776298	MapMan:13.4.1.2.5	MapMan:18.4.24.1.2.4	EMBL:ACUP02010299	ncoils:Coil
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_17G024200	GO:GO:0000226	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005819
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0030865	UniProt:I1MRF9
InterPro:IPR002048	EnsemblPlants:KRH02218	ProteinID:KRH02218	ProteinID:KRH02218.1	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR12085	PANTHER:PTHR12085:SF3	SUPFAM:SSF47473	UniParc:UPI000233DF58	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:1761218..1767071

Molecular Weight (calculated)

54824.3 Da

IEP (calculated)

4.817

GRAVY (calculated)

-0.436

Length

477 amino acids

Sequence
(BLAST)

001: MYSGSSDGES HDAPQNQRKI PPASSMLWVR NLRRFIGSGA GLGSEALMEL ETKRILLDIF KEKQKKTAEA ATIPTFYKKK PEDGSISHRV QRLAKYRFLR
101: KQSDLLLNAD DLDAMWICLR ENCVIDDATG AEKMNYEDFC HIASVCTEQI GPKCRRFFSP SNFMKFEKDE QGRIAILPFY LYVMRTVSLT QARIDMSELD
201: EDSDGFLQPH EMEAYIRGLI PNLAQLRDMP AAFVQMYCRI AAHKFFFFCD PHRRGKACIK KVLLSNCLQE LMELHQESEE EVTDTEQAEN WFSLTSAQRI
301: CDMFLALDKD TNGTLSKQEL REYADATLAD IFIERVYDEH VRRGKSGGGN AREMDFESFL DFVLALENKD TPEGLTYLFR CLDLQGRGYL TTADVHSLFR
401: DVHHKWIEGG NYELCIEDVR DEIWDMVKPA DPLKITLADL LACKQGGTVA SMLIDVRGFW AHDNRETLLQ EEEPEEE

Best Arabidopsis Sequence Match ( AT5G18580.1 )
(BLAST)

001: MYSGSSDGES HDTSTQRKIP PASSMLWVRN LRRYIGSGAG LGSEALMELE TKRILLEIFK EKQQKSQEAG TIPSFYKKKP EEGSISQRVQ KLAKYRFLKK
101: QSDLLLNADD LAAMWVCLRE NCVIDDATGA EKMNYEDFCH IASVCTEQIG PKCRRFFSPS NFMKFEKDEA GRIAILPFYL YVMRTVSLTQ ARIDMSELDE
201: DSDGFLHSDE MESYIGGLIP NLAQLRDMPP AFNQMYCRIA SQKFFFFCDP HRRGRACIKK ILLSNCLQEL MELHQESEEE VTDTEQAENW FSLTSAQRIC
301: DMFLALDKDM SGSLCKQELK EYADGTLTEI FIERVFDEHV RRGKIVAGNS REMDFDSFLD FVLALENKDT PEGLTYLFRC LDLQGRGFLT TADIHSLFRD
401: VHQKWIEGGN YELCIEDVRD EIWDMVKPSD PLKITLGDLL GCKQGGTVAS MLIDVRGFWA HDNRENLLQE EEEPPEEESQ

Arabidopsis Description

TON2Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FEE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.