CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG93968
KRH02746
KRH03466
KRH05520
KRH05863
KRH07089
KRH13458
KRH15146
KRH15497
KRH19120
KRH21856
KRH29118
KRH42233
KRH42550
KRH44391
KRH47513
KRH51797
KRH54542
KRH56919
KRH58237
KRH58350
KRH58644
KRH60720
KRH61121
KRH63357

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28900.1	KRH44391	AT1G15570.1	21798944
AT5G28900.1	KRH47513	AT1G15570.1	21798944
AT5G28900.1	KRH05520	AT1G30120.1	21798944
AT5G28900.1	KRH15497	AT1G30120.1	21798944
AT5G28900.1	KRH42550	AT1G30120.1	21798944
AT5G28900.1	KRH58644	AT1G30120.1	21798944
AT5G28900.1	KRH13458	AT1G53510.1	21798944
AT5G28900.1	KRH21856	AT1G53510.1	21798944
AT5G28900.1	KRH05863	AT1G75400.1	21798944
AT5G28900.1	KRH15146	AT1G75400.1	21798944
AT5G28900.1	KRH51797	AT1G75400.1	21798944
AT5G28900.1	KRH61121	AT1G75400.1	21798944
AT5G28900.1	KRH03466	AT3G47620.1	21798944
AT5G28900.1	KRH54542	AT3G47620.1	21798944
AT5G28900.1	KRH56919	AT3G47620.1	21798944
AT5G28900.1	KRH63357	AT3G47620.1	21798944
AT5G28900.1	KRH42233	AT3G60360.1	21798944
AT5G28900.1	KRH58350	AT3G60360.1	21798944
AT5G28900.1	KRH02746	AT4G31550.1	21798944
AT5G28900.1	KRH19120	AT4G31550.1	21798944
AT5G28900.1	KRH29118	AT4G38770.1	21798944
AT5G28900.1	KRH60720	AT4G38770.1	21798944
AT5G28900.1	KRG93968	AT5G14390.1	21798944
AT5G28900.1	KRH07089	AT5G14390.1	21798944
AT5G28900.1	KRH58237	AT5G14390.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34156	Soybean	cytosol	96.83	96.83
KRG97049	Soybean	cytosol	59.22	93.81
KRG92395	Soybean	cytosol	14.71	92.94
KRH68797	Soybean	cytosol	91.43	91.43
KRG97048	Soybean	nucleus	32.03	87.31
GSMUA_Achr8P19010_001	Banana	cytosol	53.26	87.2
KRG92396	Soybean	cytosol	12.48	87.01
CDY71370	Canola	extracellular	38.36	85.83
KRH62662	Soybean	cytosol	8.38	84.91
KRG92392	Soybean	cytosol	18.06	82.91
CDY48668	Canola	cytosol	79.52	79.37
CDX86212	Canola	cytosol	79.52	79.37
Bra010012.1-P	Field mustard	cytosol	79.52	79.37
Solyc04g010070.2.1	Tomato	plastid	79.33	79.04
AT1G54450.1	Thale cress	cytosol	78.03	78.32
GSMUA_AchrUn_...	Banana	cytosol	78.03	77.31
GSMUA_Achr11P...	Banana	cytosol	77.84	77.26
AT5G28850.2	Thale cress	cytosol	77.09	77.24
AT5G28900.1	Thale cress	cytosol	77.09	77.24
CDY44814	Canola	cytosol	77.47	77.04
Bra021340.1-P	Field mustard	cytosol	77.47	77.04
Solyc05g054980.2.1	Tomato	cytosol	77.28	76.99
Os10t0476600-01	Rice	cytosol, plasma membrane, plastid	76.54	75.97
KRH34399	Soybean	cytosol	76.35	75.79
CDY57012	Canola	cytosol	75.42	75.42
Bra036126.1-P	Field mustard	cytosol	75.42	75.42
EER94083	Sorghum	cytosol	75.79	75.23
Zm00001d032708_P009	Maize	cytosol	75.05	74.63
HORVU1Hr1G040980.1	Barley	cytosol	74.67	74.12
TraesCS1A01G153900.1	Wheat	cytosol	74.67	74.12
TraesCS1B01G171200.1	Wheat	cytosol	74.49	73.94
TraesCS1D01G152300.1	Wheat	cytosol	74.49	73.94
CDY00020	Canola	cytosol	74.3	73.75
Zm00001d014037_P004	Maize	cytosol	74.86	70.03
KRG92401	Soybean	cytosol, plastid	18.44	62.66
KRG92399	Soybean	cytosol	3.54	57.58
KRH50907	Soybean	cytosol	18.44	20.75
KRH02218	Soybean	cytosol	18.25	20.55

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	EntrezGene:100799748	MapMan:18.4.24.1.2.4	EMBL:ACUP02012764
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_20G222700	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	UniProt:I1NIM7	InterPro:IPR002048	ProteinID:KRG92625.1	EnsemblPlants:KRG92626	ProteinID:KRG92626
ProteinID:KRG92626.1	ProteinID:KRG92627.1	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR14095
PANTHER:PTHR14095:SF7	SUPFAM:SSF47473	UniParc:UPI000233DD05	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr20:-:45733077..45742254

Molecular Weight (calculated)

62175.1 Da

IEP (calculated)

4.644

GRAVY (calculated)

-0.328

Length

537 amino acids

Sequence
(BLAST)

001: MNMEVVTDAA SLDVELLQLP EFSGLALKSN LNFIEKLFNQ WLSLPESNRL VTSLLNEAKS GVPLNVPGNC SSPNASSNSL PSMFPAGTAP PLSPRSTSGS
101: PRIVKQRVGP SNLGSPLKVV SEPVKEVIPQ FYFQHGRPPP NELKEECLFK IDRLFYDHMD GMQVHEFKSI TKEVCKLPSF FSTSLFQKID NGTGVVTRKT
201: FIEYWIDGNM LVMDIAALIF KILKQPQLNY LTQDDFKPVL RELLATHPGL EFLQGTPEFQ ERYAETVIYR IYYYINRSGN GCLTLRELKR GNIIDAMQHA
301: DEEEDINKVL RYFSYEHFYV IYCKFWELDT DHDFFIDKEN LIRYGNHALT YRIVDRIFSQ VPRKFTSKVE GKMGYEDFVY FILSEEDKSS EPSLEYWFKC
401: IDLDGNGVLT RNELQFFYEE QLHRMECMAQ EPVLFEDILC QIIDMIKPED ESVITLHDLK GGKLSGSVFN ILFNLNKFMA FETRDPFLIR QERENPTLTE
501: WDRFAHREYI RLSMEEDIED ASNGSAEVWD ESLEAPF

Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)

001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF

Arabidopsis Description

B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.