CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92626
KRG97048
KRG97049
KRH24392
KRH29374
KRH34156
KRH51475
KRH60786
KRH68797

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01690.1	KRH24392	AT4G39050.1	21798944
AT3G01690.1	KRH29374	AT4G39050.1	21798944
AT3G01690.1	KRH51475	AT4G39050.1	21798944
AT3G01690.1	KRH60786	AT4G39050.1	21798944
AT3G01690.1	KRG92626	AT5G28900.1	21798944
AT3G01690.1	KRG97048	AT5G28900.1	21798944
AT3G01690.1	KRG97049	AT5G28900.1	21798944
AT3G01690.1	KRH34156	AT5G28900.1	21798944
AT3G01690.1	KRH68797	AT5G28900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58237	Soybean	cytosol	96.46	96.46
KRH07089	Soybean	cytosol	89.65	89.4
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	88.28	88.04
Solyc02g067920.2.1	Tomato	cytosol	83.65	82.97
PGSC0003DMT400017818	Potato	cytosol	83.11	82.21
CDX91066	Canola	plastid	68.12	76.22
AT3G01690.1	Thale cress	cytosol, plastid	74.93	76.18
KRH54278	Soybean	endoplasmic reticulum	78.2	75.33
GSMUA_Achr9P02010_001	Banana	plastid	74.93	74.93
Bra008761.1-P	Field mustard	endoplasmic reticulum	75.48	74.86
CDY09851	Canola	plastid	75.48	74.86
CDX69584	Canola	endoplasmic reticulum	75.2	74.59
CDY32850	Canola	cytosol	69.75	74.42
GSMUA_Achr3P17130_001	Banana	plastid	74.39	74.39
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	74.66	74.25
KRG94364	Soybean	cytosol	28.07	74.1
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	76.57	73.95
GSMUA_Achr8P28640_001	Banana	plastid	73.84	73.84
CDY37505	Canola	cytosol, extracellular	13.35	73.13
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	71.66	72.85
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	71.66	72.85
CDX85599	Canola	cytosol	50.41	70.88
KRH57170	Soybean	plastid	70.3	69.54
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	69.21	69.21
GSMUA_Achr9P07620_001	Banana	plastid	68.66	68.48
KRH03885	Soybean	cytosol, plastid	69.21	68.46
Zm00001d030601_P001	Maize	plastid	67.57	67.57
Bra023463.1-P	Field mustard	cytosol	50.41	67.27
Os12t0286600-01	Rice	cytosol, plastid	68.66	66.84
CDX77081	Canola	plastid	37.87	65.88
KRG93729	Soybean	cytosol	64.85	62.96
KRH01428	Soybean	plastid	64.85	62.63
KRH18325	Soybean	cytosol, nucleus, peroxisome	64.03	62.17
KRH45145	Soybean	plastid	63.76	61.26
KRH20089	Soybean	cytosol	46.59	58.36
KRH18213	Soybean	plastid	55.31	57.51
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	50.41	56.57
KRH12940	Soybean	cytosol	45.78	56.57
KRG93935	Soybean	plastid	54.5	56.5
KRG99188	Soybean	extracellular	14.17	49.52
KRH74343	Soybean	extracellular	45.78	41.28
KRH39591	Soybean	extracellular, mitochondrion, nucleus	45.5	40.93

Protein Annotations

EMBL:ACUP02011658	EnsemblPlants:KRG93968	EnsemblPlantsGene:GLYMA_19G053300	EntrezGene:100798839	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
InterPro:Hydrolase_4	InterPro:IPR029058	ncoils:Coil	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146
ProteinID:KRG93968	ProteinID:KRG93968.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000233E72D	UniProt:K7MWQ6
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:8686897..8690661

Molecular Weight (calculated)

42298.0 Da

IEP (calculated)

9.390

GRAVY (calculated)

-0.514

Length

367 amino acids

Sequence
(BLAST)

001: MGGMTSSMAA KLAFFPPHPA SYKVVKDEVT SLLLLSPFPH RENVEILKLP TRRGAEIVSM YVRHPMAAST VLYSHGNATD LGQMYELFIQ LSIHLRVNLI
101: GYDYSGYGQS SGKPSEQNTY ADIEAVYKCL EESYGTKQED IILYGQSVGS GPTLDLAARL PQLRAVVLHS PILSGLRVMY PVKRSYWFDI YKNIDKIPLV
201: NCPVLIIHGT SDEVVDCSHG KQLWELCKEK YEPLWLKGGN HCDLEQFPEY IRHLKKFIAT VEKSPSQRYS FRRSMEQFEQ PRKSTDIFEV IRKSTDRREK
301: PRLITDRPEK LKNLSNNADK LEKLRVTFDH MDRSRRSVDC LEKSRKSIDH QLEKARKSVD RLERIRT

Best Arabidopsis Sequence Match ( AT5G14390.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPS SYKLVYDELT GLLLMNPFPH RENVEILKLP TRRGTEIVAM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHHTY ADIEAAYKCL EETYGAKQED IILYGQSVGS GPTLDLAARL PQLRAAVLHS PILSGLRVMY PVKKTYWFDI FKNIDKIPLV
201: NCPVLVIHGT CDEVVDCSHG KQLWELSKEK YEPLWLEGGN HCDLEHYPEY IKHLKKFITT VERDLSSRAS TAQLEKQSSD LEMPRQSVDR REKPRQSVDK
301: REKEKPPKGP SKKSKLRITF EQHLDRTRRS VDFHEKARKS VDHHQHHQNH HQIERGRKSV DRLDRVRSE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LY90]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.