CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92626
KRG97048
KRG97049
KRH24392
KRH29374
KRH34156
KRH51475
KRH60786
KRH68797

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01690.1	KRH24392	AT4G39050.1	21798944
AT3G01690.1	KRH29374	AT4G39050.1	21798944
AT3G01690.1	KRH51475	AT4G39050.1	21798944
AT3G01690.1	KRH60786	AT4G39050.1	21798944
AT3G01690.1	KRG92626	AT5G28900.1	21798944
AT3G01690.1	KRG97048	AT5G28900.1	21798944
AT3G01690.1	KRG97049	AT5G28900.1	21798944
AT3G01690.1	KRH34156	AT5G28900.1	21798944
AT3G01690.1	KRH68797	AT5G28900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	90.76	90.76
KRG93968	Soybean	cytosol	89.4	89.65
KRH58237	Soybean	cytosol	88.86	89.1
Solyc02g067920.2.1	Tomato	cytosol	86.14	85.68
PGSC0003DMT400017818	Potato	cytosol	85.05	84.37
KRG94364	Soybean	cytosol	30.71	81.3
AT3G01690.1	Thale cress	cytosol, plastid	76.36	77.84
CDX91066	Canola	plastid	69.29	77.74
GSMUA_Achr9P02010_001	Banana	plastid	77.17	77.38
CDY09851	Canola	plastid	77.72	77.3
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	77.17	76.96
Bra008761.1-P	Field mustard	endoplasmic reticulum	77.17	76.76
GSMUA_Achr3P17130_001	Banana	plastid	76.36	76.57
CDX69584	Canola	endoplasmic reticulum	76.9	76.49
GSMUA_Achr8P28640_001	Banana	plastid	76.09	76.29
CDY32850	Canola	cytosol	71.2	76.16
CDY37505	Canola	cytosol, extracellular	13.86	76.12
KRH54278	Soybean	endoplasmic reticulum	78.26	75.59
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	77.17	74.74
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	73.1	74.52
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	73.1	74.52
KRH57170	Soybean	plastid	72.83	72.24
GSMUA_Achr9P07620_001	Banana	plastid	71.74	71.74
KRH03885	Soybean	cytosol, plastid	71.74	71.16
CDX85599	Canola	cytosol	50.27	70.88
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	70.65	70.84
Zm00001d030601_P001	Maize	plastid	69.57	69.75
Os12t0286600-01	Rice	cytosol, plastid	70.65	68.97
Bra023463.1-P	Field mustard	cytosol	50.27	67.27
CDX77081	Canola	plastid	38.04	66.35
KRH01428	Soybean	plastid	67.93	65.79
KRG93729	Soybean	cytosol	67.12	65.34
KRH18325	Soybean	cytosol, nucleus, peroxisome	66.58	64.81
KRH45145	Soybean	plastid	67.12	64.66
KRH20089	Soybean	cytosol	48.37	60.75
KRH18213	Soybean	plastid	57.34	59.77
KRG93935	Soybean	plastid	57.07	59.32
KRH12940	Soybean	cytosol	46.2	57.24
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	50.27	56.57
KRG99188	Soybean	extracellular	15.49	54.29
KRH74343	Soybean	extracellular	47.01	42.51
KRH39591	Soybean	extracellular, mitochondrion, nucleus	46.74	42.16

Protein Annotations

EMBL:ACUP02009931	EnsemblPlants:KRH07089	EnsemblPlantsGene:GLYMA_16G067500	EntrezGene:100799278	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	ProteinID:KRH07089
ProteinID:KRH07089.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000233ABF0	UniProt:I1MLR6	MapMan:35.2

Description

hypothetical protein

Coordinates

chr16:-:6679009..6683608

Molecular Weight (calculated)

42328.7 Da

IEP (calculated)

9.386

GRAVY (calculated)

-0.639

Length

368 amino acids

Sequence
(BLAST)

001: MGGVTSSMAA KFAFFPPNPP SYKVVTDDMT GLLLLTPFPH RENVEIQKLP TRRGTEIVAL YIRHPMATST VLYSHGNAAD LGQMYELFIQ LSIHLRVNLM
101: GYDYSGYGQS SGKPSEQNTY SDIEAAYKCL EESYGAKQED IILYGQSVGS GPTLDLAARL PQLRAVVLHS PILSGLRVMY PVKRTYWFDI YKNIDKIPQV
201: NCPVLIIHGT SDEVVDCSHG KQLWELCKEK YEPLWLKGGN HCDLELFPEY IRHLKKFITT VEKSPSQRYS FRRSTDQFEQ PRKSTDIFEV SRKSTDRREK
301: PRKSTDKPEK LKNLSNNSDM LEKLRMTFDH KERSRRSVDC HEKSRKSIDH QLEKARKSVD RLDRIRSG

Best Arabidopsis Sequence Match ( AT5G14390.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPS SYKLVYDELT GLLLMNPFPH RENVEILKLP TRRGTEIVAM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHHTY ADIEAAYKCL EETYGAKQED IILYGQSVGS GPTLDLAARL PQLRAAVLHS PILSGLRVMY PVKKTYWFDI FKNIDKIPLV
201: NCPVLVIHGT CDEVVDCSHG KQLWELSKEK YEPLWLEGGN HCDLEHYPEY IKHLKKFITT VERDLSSRAS TAQLEKQSSD LEMPRQSVDR REKPRQSVDK
301: REKEKPPKGP SKKSKLRITF EQHLDRTRRS VDFHEKARKS VDHHQHHQNH HQIERGRKSV DRLDRVRSE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LY90]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.