Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid, secretory
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:nucleus
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
EER94083
KXG38192

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G01690.1 KXG38192 AT4G39050.1 21798944
AT3G01690.1 EER94083 AT5G28900.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d030601_P001 Maize plastid 95.64 95.64
Os12t0286600-01 Rice cytosol, plastid 89.92 87.53
CDY31930 Canola cytosol 13.62 78.12
GSMUA_Achr9P02010_001 Banana plastid 75.48 75.48
GSMUA_Achr3P17130_001 Banana plastid 74.93 74.93
GSMUA_Achr8P28640_001 Banana plastid 73.57 73.57
VIT_14s0219g00290.t01 Wine grape cytosol, endoplasmic reticulum, nucleus 71.66 71.47
KRH07089 Soybean cytosol 70.84 70.65
Solyc02g067920.2.1 Tomato cytosol 71.12 70.54
PGSC0003DMT400017818 Potato cytosol 70.57 69.81
KRG93968 Soybean cytosol 69.21 69.21
Solyc03g111770.2.1 Tomato cytosol 69.48 68.73
KRH58237 Soybean cytosol 68.66 68.66
GSMUA_Achr9P07620_001 Banana plastid 68.66 68.48
PGSC0003DMT400039199 Potato cytosol 69.21 68.46
CDY37504 Canola cytosol 14.17 68.42
AT3G01690.1 Thale cress cytosol, plastid 66.21 67.31
AT4G24760.1 Thale cress cytosol, nucleus, plastid 66.76 67.12
VIT_17s0000g09740.t01 Wine grape cytosol, endoplasmic reticulum, nucleus 70.03 66.41
CDY03421 Canola cytosol 64.85 66.3
CDX91066 Canola plastid 59.13 66.16
CDY37505 Canola cytosol, extracellular 11.99 65.67
KRH54278 Soybean endoplasmic reticulum 67.85 65.35
CDY34308 Canola cytosol 65.12 65.3
Bra013831.1-P Field mustard cytosol 65.12 65.3
KRH63667 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 66.76 64.47
Bra008761.1-P Field mustard endoplasmic reticulum 64.85 64.32
CDX69584 Canola endoplasmic reticulum 64.85 64.32
CDY09851 Canola plastid 64.85 64.32
AT5G14390.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 64.31 63.96
CDY32850 Canola cytosol 59.13 63.08
KRG94364 Soybean cytosol 23.71 62.59
KRH03885 Soybean cytosol, plastid 62.67 61.99
KRH57170 Soybean plastid 62.4 61.73
CDY28862 Canola cytosol, endoplasmic reticulum, nucleus, plastid 60.49 61.5
CDY28668 Canola cytosol, endoplasmic reticulum, nucleus, plastid 60.49 61.5
OQU76743 Sorghum cytosol, mitochondrion 52.86 61.39
CDX85599 Canola cytosol 43.32 60.92
CDY11031 Canola cytosol, plastid 38.42 59.0
CDX77081 Canola plastid 33.52 58.29
Bra023463.1-P Field mustard cytosol 43.32 57.82
CDX92650 Canola cytosol 65.94 55.76
KXG31273 Sorghum plastid 45.78 55.26
EES06425 Sorghum plastid 59.95 53.79
EES01292 Sorghum plastid 54.22 53.78
Bra040701.1-P Field mustard plastid 46.59 52.62
GSMUA_Achr9P22710_001 Banana endoplasmic reticulum, golgi 45.78 51.38
KXG25721 Sorghum cytosol 57.22 50.97
KRG99188 Soybean extracellular 13.08 45.71
CDY53272 Canola plastid 19.07 44.59
EES14598 Sorghum plastid 43.87 43.99
Bra019211.1-P Field mustard nucleus 65.12 43.3
Protein Annotations
EnsemblPlants:OQU79022EnsemblPlantsGene:SORBI_3008G088830Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:Hydrolase_4InterPro:IPR029058
PANTHER:PTHR12277PANTHER:PTHR12277:SF118PFAM:PF12146ProteinID:KXG19015.1ProteinID:OQU79022ProteinID:OQU79022.1
SEG:segSUPFAM:SSF53474UniParc:UPI00076BBF76UniProt:A0A109NDT1MapMan:35.2:
Description
hypothetical protein
Coordinates
chr8:+:20861686..20877386
Molecular Weight (calculated)
42024.9 Da
IEP (calculated)
9.149
GRAVY (calculated)
-0.584
Length
367 amino acids
Sequence
(BLAST)
001: MGGVTSSVAA KMAFFPPTPP SYALVEDAGA GVTTLSGQPH RENVELLRLR TRKGNTLAAM YVRHPDAAST VLYSHGNAAD LGHLYQLFLH LSFNLRVNIL
101: GYDYSGYGQS SGKPSEHNTY ADIEAAYKCL IENFGAKEEE IILYGQSVGS GPTVDLASRL PQLRAVVLHS PILSGLRVMY PVKRTYWFDI YKNIDKIPQV
201: TCPVLIIHGT ADEVVDWSHG KQLWELCKEK YEPLWLRGGK HCDLELFPEY IQHLKKFFHT VEKSPSHRQA WRESGDRIEP SRKSIDFFEP SRKSTDQSEK
301: SRSTRDRTRN KEHRYSNFEK VDKLKISFDQ FEKSRRSVDI FERPKRNIEQ LDCGRKSVDR LDRIWAS
Best Arabidopsis Sequence Match ( AT3G01690.1 )
(BLAST)
001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.