CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92686
EER95222
EER99582
EES01579
EES01580
EES03779
EES07212
EES12552
EES15909
KXG23504
KXG23720
KXG37075
KXG37592
KXG37778
KXG37982
KXG38100
OQU77084
OQU79520
OQU80698
OQU82869
OQU84043
OQU84226

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39050.1	EER99582	AT1G03140.1	21798944
AT4G39050.1	KXG37778	AT1G03140.1	21798944
AT4G39050.1	KXG23504	AT1G15570.1	21798944
AT4G39050.1	OQU77084	AT1G15570.1	21798944
AT4G39050.1	EER95222	AT1G55890.1	21798944
AT4G39050.1	EES01579	AT1G55890.1	21798944
AT4G39050.1	EES01580	AT1G55890.1	21798944
AT4G39050.1	OQU84226	AT2G17670.1	21798944
AT4G39050.1	KXG37592	AT2G30580.1	21798944
AT4G39050.1	KXG37982	AT2G30580.1	21798944
AT4G39050.1	OQU79520	AT2G30580.1	21798944
AT4G39050.1	KXG37075	AT2G36990.1	21798944
AT4G39050.1	EES07212	AT3G15360.1	21798944
AT4G39050.1	EES12552	AT3G15360.1	21798944
AT4G39050.1	EES03779	AT3G60360.1	21798944
AT4G39050.1	KXG23720	AT4G24680.1	21798944
AT4G39050.1	OQU84043	AT4G24680.1	21798944
AT4G39050.1	OQU80698	AT5G22890.1	21798944
AT4G39050.1	KXG38100	AT5G49210.1	21798944
AT4G39050.1	OQU82869	AT5G49210.1	21798944
AT4G39050.1	EES15909	AT5G63350.1	21798944
AT4G39050.1	EER92686	AT5G67530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032464_P008	Maize	plastid	94.57	92.45
Zm00001d013859_P002	Maize	plastid	92.75	90.68
TraesCS1A01G177600.1	Wheat	plastid	87.04	87.7
TraesCS1D01G176100.1	Wheat	plastid	86.75	87.42
TraesCS1B01G202600.1	Wheat	plastid	86.56	87.22
Os10t0512800-01	Rice	plastid	87.23	86.4
HORVU1Hr1G047110.10	Barley	plastid	83.41	83.73
VIT_03s0038g00350.t01	Wine grape	plastid	69.49	66.21
CDX72718	Canola	plastid	64.06	66.08
CDY12116	Canola	plastid	64.54	65.54
CDX90305	Canola	plastid	64.44	65.44
CDY22394	Canola	plastid	64.63	65.38
Solyc10g054080.1.1	Tomato	plastid	65.97	64.98
AT4G39050.1	Thale cress	plastid	65.11	64.74
Solyc11g044880.1.1	Tomato	plastid	65.78	64.67
Bra010714.1-P	Field mustard	plastid	64.63	64.51
AT2G21380.2	Thale cress	plastid	62.82	62.29
CDX82022	Canola	plastid	62.63	61.34
Bra031184.1-P	Field mustard	plastid	62.54	61.19
Solyc01g110190.2.1	Tomato	plastid	59.58	58.47
Bra033597.1-P	Field mustard	cytosol	64.82	55.78
GSMUA_Achr8P11730_001	Banana	plastid	69.78	55.45
PGSC0003DMT400008772	Potato	cytosol	24.79	54.28
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	49.28	54.25
KXG31200	Sorghum	mitochondrion, plastid	44.61	46.94
EES12188	Sorghum	plastid	50.14	45.46
KRH16381	Soybean	cytosol	19.73	31.22
KXG28623	Sorghum	cytosol	17.45	28.77
EER89062	Sorghum	cytosol	18.49	20.42
KXG31119	Sorghum	cytosol	17.06	20.29
KXG26789	Sorghum	nucleus	17.73	19.56
OQU89071	Sorghum	cytosol	18.4	18.7
KXG36051	Sorghum	cytosol	16.3	18.53
EES14087	Sorghum	cytosol	17.45	18.14
EES18930	Sorghum	cytosol	18.11	18.06
KXG35645	Sorghum	cytosol	20.88	17.85
EES09071	Sorghum	plastid	18.59	17.78
KXG25443	Sorghum	cytosol	16.87	17.27
EER95074	Sorghum	cytosol, plastid	17.35	17.2
KXG25952	Sorghum	cytosol, plastid	18.3	16.9
OQU78566	Sorghum	cytosol	18.21	16.34
OQU90984	Sorghum	cytosol	18.59	15.58
KXG30782	Sorghum	cytosol	17.54	14.55
EER91274	Sorghum	mitochondrion	15.16	14.12
KXG36788	Sorghum	plastid	19.92	10.85
OQU79463	Sorghum	cytosol	20.78	8.09

Protein Annotations

MapMan:20.1.3.6	Gene3D:3.30.40.10	Gene3D:3.40.850.10	UniProt:A0A1B6QJU7	ncoils:Coil	GO:GO:0000166
GO:GO:0000287	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	GO:GO:0016887	GO:GO:0042803	GO:GO:0043531	InterPro:IPR001752	InterPro:IPR001841
InterPro:IPR013083	InterPro:IPR036961	EnsemblPlants:KXG38192	ProteinID:KXG38192	ProteinID:KXG38192.1	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF13920
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PFscan:PS50089	PANTHER:PTHR24115	PANTHER:PTHR24115:SF497
SMART:SM00129	EnsemblPlantsGene:SORBI_3001G196000	SUPFAM:SSF52540	SUPFAM:SSF57850	UniParc:UPI000220701F	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:17610486..17622072

Molecular Weight (calculated)

115896.0 Da

IEP (calculated)

5.973

GRAVY (calculated)

-0.550

Length

1049 amino acids

Sequence
(BLAST)

0001: MSSRPSTSSS RRSSSPFSAG HRRPPTASSS SSSSYFSSGR LIPRSSPSSV SSSFYGGGGG GSTRSTTPGR RSSSVAPAPA PPPALAPVPF PSADELVIED
0101: TSRSGDSISV TIRFRPLSER EFQRGDEISW YPDGDRLVRC EYNPATAYAY DRVFGPSTTT EAVYDVAARP VVKGAMEGIN GTVFAYGVTS SGKTHTMHGD
0201: QNCPGIIPLA IKDVFGMIQD SPGREFLLRV SYLEIYNEVI NDLLDPTGQN LRVREDAQGT YVEGIKEEVV LSPGHALSFI AAGEEHRHVG SNNFNLFSSR
0301: SHTIFTLMIE SSDRGDEYDG VMYSQLNLID LAGSESSKTE TTGLRRREGS YINKSLLTLG TVIGKLSEGR ATHIPYRDSK LTRLLQSSLS GHGHVSLICT
0401: ITPASSNMEE THNTLKFASR AKRVEIYASR NRIIDEKSLI KKYQKEISSL KQELDQLRRG MIGGASHEEI MSLRQQLEEG QVKMQSRLEE EEEAKAALMS
0501: RIQRLTKLIL VSTKNNIPAL TDGHQRHNSV SEQDKLSTSQ DSSTLVQNEG TTKDPLSDSL DEINQLRSGS GEHSSVTGSA ADSTQAGFTA SDHMDLLIEQ
0601: IKMLAGEVAF GTSSLKRLIE QSIDDPEGTK DQIENLEREI QQKRRHMRAL EKQIMESGEA SVANASMVDM QQTITKLTAQ CGEKAFELEL KSADNRVLQE
0701: QLQQKNVEIN DLQEKVFRLE QQLSAKVDIF PEQETDCAQQ EAIDLKSKLQ SKEAEIEKLK FEHLKITEEH CDLINQNHKL SEEAAYAKEL ASSAAVELKN
0801: LAEEVTKLSV LNAKQAKELL VAQEMAHSRV HGRKGRATSR GRDEVGTWSL DLEDMKMELQ ARRQREAALE AALAEKELLE EEYKKKFDEA KKKELSLEND
0901: LAGMWVLVAK LKKGALGISD LNVDDRTVNL ADITNGTKEN KGEKNFALVE KQISDDSVKS LSTEGHRSPE FEPLLVRLKA KIQEMKEKDT DPLSDKDGNS
1001: HVCKVCFESA TAAVLLPCRH FCLCKPCSLA CSECPLCRTR IADRIITFT

Best Arabidopsis Sequence Match ( AT4G39050.1 )
(BLAST)

0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS

Arabidopsis Description

KIN7DKinesin-like protein KIN-7D, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.