CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90022
EER92716
EER93165
EER95273
EES06473
EES07849
EES11990
KXG22761
KXG30263

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G49210.1	EER90022	AT2G25490.1	21798944
AT5G49210.1	EES06473	AT2G25490.1	21798944
AT5G49210.1	EES07849	AT3G08530.1	21798944
AT5G49210.1	KXG22761	AT3G08530.1	21798944
AT5G49210.1	EES11990	AT3G11590.1	21798944
AT5G49210.1	KXG30263	AT3G11590.1	21798944
AT5G49210.1	EER95273	AT4G17220.1	21798944
AT5G49210.1	EER92716	AT5G11980.1	21798944
AT5G49210.1	EER93165	AT5G51110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004927_P001	Maize	mitochondrion	91.21	89.25
Os11t0148600-01	Rice	mitochondrion	79.67	77.96
TraesCS4B01G134100.1	Wheat	mitochondrion	79.12	75.39
TraesCS4D01G129000.1	Wheat	mitochondrion	78.57	74.87
TraesCS4A01G184600.1	Wheat	mitochondrion	78.57	74.87
Os12t0146400-01	Rice	mitochondrion	37.91	65.09
HORVU4Hr1G025670.1	Barley	mitochondrion	76.92	64.81
KXG38100	Sorghum	plastid	60.99	48.47
KRH01771	Soybean	mitochondrion	46.15	48.0
KRH46915	Soybean	mitochondrion	45.6	46.63
GSMUA_Achr1P11210_001	Banana	mitochondrion	54.4	46.48
VIT_05s0029g01220.t01	Wine grape	mitochondrion	48.35	44.9
Solyc05g053730.2.1	Tomato	nucleus	45.6	41.5
PGSC0003DMT400040750	Potato	mitochondrion	45.05	41.0
CDY56435	Canola	mitochondrion	41.76	39.38
AT5G49210.1	Thale cress	mitochondrion	40.66	37.95
CDX86248	Canola	mitochondrion	40.11	37.82
Bra037430.1-P	Field mustard	mitochondrion	40.11	37.82
CDY33924	Canola	mitochondrion, nucleus	40.66	37.56
Bra020657.1-P	Field mustard	mitochondrion, nucleus	40.66	37.56
CDY70877	Canola	mitochondrion	41.76	33.63

Protein Annotations

EnsemblPlants:OQU82869	EnsemblPlantsGene:SORBI_3005G034600	EntrezGene:8085658	ncoils:Coil	PANTHER:PTHR36402	ProteinID:OQU82869
ProteinID:OQU82869.1	ProteinID:OQU82870.1	RefSeq:XP_002450271.1	SEG:seg	UniParc:UPI0001A86827	UniProt:A0A1Z5RGZ6
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:3106338..3110362

Molecular Weight (calculated)

21297.5 Da

IEP (calculated)

10.902

GRAVY (calculated)

-1.032

Length

182 amino acids

Sequence
(BLAST)

001: MALSSSRPHH LLRGFHASAR ALARAEPHEF AKPSGYLGSW EPAAEPREAW ARLDRLRKGY ARDVRQLRRQ YAYEVQLMDA ERQRKADARA EAARIANQER
101: KAAKLAAAQT RAAERRAFEE DFRQTLMKER AEKLESWRKK EKLKEQKKAE QKELLRRKSS MWLSEDKIEQ QILTAIMQTT PL

Best Arabidopsis Sequence Match ( AT5G49210.1 )
(BLAST)

001: MAFCNKLSRF VRRQSENASM IGSLRSFSAD ATHHRFHQET HNFLEPEYYI GSWEAPSDPK DAERKLAQLR RDYAKKVRVY RKEYIHEIEM LRVEKQRKDE
101: ARLLAERAAN EERRLLKAEA AKVRAEERKI ADEEFRQTLI KERAEKLEMW KMMGQKREEK IKEREKLLRE QSSLWIEQKE LERKITEALV DNVVL

Arabidopsis Description

AT5g49210/K21P3_8 [Source:UniProtKB/TrEMBL;Acc:Q945P2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.