Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G184600.1 | Wheat | mitochondrion | 84.72 | 95.81 |
| TraesCS4D01G129000.1 | Wheat | mitochondrion | 84.26 | 95.29 |
| TraesCS4B01G134100.1 | Wheat | mitochondrion | 84.26 | 95.29 |
| Os11t0148600-01 | Rice | mitochondrion | 68.06 | 79.03 |
| OQU82869 | Sorghum | mitochondrion | 64.81 | 76.92 |
| Zm00001d004927_P001 | Maize | mitochondrion | 64.81 | 75.27 |
| Os12t0146400-01 | Rice | mitochondrion | 31.48 | 64.15 |
| KRH01771 | Soybean | mitochondrion | 38.43 | 47.43 |
| KRH46915 | Soybean | mitochondrion | 38.89 | 47.19 |
| VIT_05s0029g01220.t01 | Wine grape | mitochondrion | 41.2 | 45.41 |
| KXG38100 | Sorghum | plastid | 46.3 | 43.67 |
| GSMUA_Achr1P11210_001 | Banana | mitochondrion | 42.59 | 43.19 |
| Solyc05g053730.2.1 | Tomato | nucleus | 38.89 | 42.0 |
| PGSC0003DMT400040750 | Potato | mitochondrion | 38.43 | 41.5 |
| CDY56435 | Canola | mitochondrion | 35.65 | 39.9 |
| CDY33924 | Canola | mitochondrion, nucleus | 35.65 | 39.09 |
| Bra020657.1-P | Field mustard | mitochondrion, nucleus | 35.65 | 39.09 |
| CDX86248 | Canola | mitochondrion | 34.72 | 38.86 |
| Bra037430.1-P | Field mustard | mitochondrion | 34.72 | 38.86 |
| AT5G49210.1 | Thale cress | mitochondrion | 33.8 | 37.44 |
| CDY70877 | Canola | mitochondrion | 36.11 | 34.51 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G025670.1 | EnsemblPlantsGene:HORVU4Hr1G025670 | ncoils:Coil | PANTHER:PTHR36402 | SEG:seg | UniParc:UPI000B473A7E |
| UniProt:A0A287NL59 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:149703122..149706416
Molecular Weight (calculated)
24698.4 Da
IEP (calculated)
10.943
GRAVY (calculated)
-0.843
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: ESIKRTLSPS FSGRFFSTAI CPTAAMALST SRPHHLLRRF HASARALARV EPHDFSQPSD YLGSWGERPP ATVAAGGGDT REAWARLERL RKGYAREVGE
101: LRRQYAYEAQ LLEAERQRKA EARAEAARVA NEERKAAKAA AAQTRAAERR AFELDFRQAL MKERAQKLES WRNKEKLKAQ KKTDHRELLR RQSSVWVSED
201: KMEKKILEAI MHTTPL
101: LRRQYAYEAQ LLEAERQRKA EARAEAARVA NEERKAAKAA AAQTRAAERR AFELDFRQAL MKERAQKLES WRNKEKLKAQ KKTDHRELLR RQSSVWVSED
201: KMEKKILEAI MHTTPL
001: MAFCNKLSRF VRRQSENASM IGSLRSFSAD ATHHRFHQET HNFLEPEYYI GSWEAPSDPK DAERKLAQLR RDYAKKVRVY RKEYIHEIEM LRVEKQRKDE
101: ARLLAERAAN EERRLLKAEA AKVRAEERKI ADEEFRQTLI KERAEKLEMW KMMGQKREEK IKEREKLLRE QSSLWIEQKE LERKITEALV DNVVL
101: ARLLAERAAN EERRLLKAEA AKVRAEERKI ADEEFRQTLI KERAEKLEMW KMMGQKREEK IKEREKLLRE QSSLWIEQKE LERKITEALV DNVVL
Arabidopsis Description
AT5g49210/K21P3_8 [Source:UniProtKB/TrEMBL;Acc:Q945P2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.