Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU82869 | Sorghum | mitochondrion | 89.25 | 91.21 |
| Os11t0148600-01 | Rice | mitochondrion | 76.88 | 76.88 |
| TraesCS4D01G129000.1 | Wheat | mitochondrion | 76.34 | 74.35 |
| TraesCS4A01G184600.1 | Wheat | mitochondrion | 76.34 | 74.35 |
| TraesCS4B01G134100.1 | Wheat | mitochondrion | 75.81 | 73.82 |
| Os12t0146400-01 | Rice | mitochondrion | 38.17 | 66.98 |
| HORVU4Hr1G025670.1 | Barley | mitochondrion | 75.27 | 64.81 |
| KRH01771 | Soybean | mitochondrion | 45.16 | 48.0 |
| KRH46915 | Soybean | mitochondrion | 45.7 | 47.75 |
| GSMUA_Achr1P11210_001 | Banana | mitochondrion | 54.3 | 47.42 |
| KXG38100 | Sorghum | plastid | 57.53 | 46.72 |
| VIT_05s0029g01220.t01 | Wine grape | mitochondrion | 47.85 | 45.41 |
| Solyc05g053730.2.1 | Tomato | nucleus | 45.7 | 42.5 |
| PGSC0003DMT400040750 | Potato | mitochondrion | 45.16 | 42.0 |
| CDY56435 | Canola | mitochondrion | 41.94 | 40.41 |
| CDX86248 | Canola | mitochondrion | 40.86 | 39.38 |
| CDY33924 | Canola | mitochondrion, nucleus | 41.4 | 39.09 |
| Bra020657.1-P | Field mustard | mitochondrion, nucleus | 41.4 | 39.09 |
| AT5G49210.1 | Thale cress | mitochondrion | 40.86 | 38.97 |
| Bra037430.1-P | Field mustard | mitochondrion | 40.32 | 38.86 |
| CDY70877 | Canola | mitochondrion | 43.01 | 35.4 |
Protein Annotations
| EnsemblPlants:Zm00001d004927_P001 | EnsemblPlants:Zm00001d004927_T001 | EnsemblPlantsGene:Zm00001d004927 | EntrezGene:107305673 | ncoils:Coil | PANTHER:PTHR36402 |
| ProteinID:ONM19814.1 | SEG:seg | UniParc:UPI0002219066 | UniProt:A0A1D6EI75 | MapMan:35.2 | : |
Description
Os12g0146300 protein
Coordinates
chr2:+:149224009..149226714
Molecular Weight (calculated)
21827.2 Da
IEP (calculated)
10.891
GRAVY (calculated)
-1.047
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSSSRPKH LLRPILRGFH ASARALARVE PHEFSKPSEY LGSWEPAAEP REAWARLDRL RKGYASEVRE LRRQYAYEVQ LLQAERQRKA DARAEAARAA
101: NQERKAAKLA AAQTRAAERR AFEEDFRQTL MKERAEKLES WRKKEKRKEE KKAIKKELLR RKSSMWLSED KIEEQIQTAI MQTTPL
101: NQERKAAKLA AAQTRAAERR AFEEDFRQTL MKERAEKLES WRKKEKRKEE KKAIKKELLR RKSSMWLSED KIEEQIQTAI MQTTPL
001: MAFCNKLSRF VRRQSENASM IGSLRSFSAD ATHHRFHQET HNFLEPEYYI GSWEAPSDPK DAERKLAQLR RDYAKKVRVY RKEYIHEIEM LRVEKQRKDE
101: ARLLAERAAN EERRLLKAEA AKVRAEERKI ADEEFRQTLI KERAEKLEMW KMMGQKREEK IKEREKLLRE QSSLWIEQKE LERKITEALV DNVVL
101: ARLLAERAAN EERRLLKAEA AKVRAEERKI ADEEFRQTLI KERAEKLEMW KMMGQKREEK IKEREKLLRE QSSLWIEQKE LERKITEALV DNVVL
Arabidopsis Description
AT5g49210/K21P3_8 [Source:UniProtKB/TrEMBL;Acc:Q945P2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.