Factsheet for Zm00001d015778_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007188_P001
Zm00001d011238_P001
Zm00001d022530_P001
Zm00001d028974_P001
Zm00001d042193_P001
Zm00001d047563_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25490.1	Zm00001d007188_P001	AT2G27050.1	14675533
AT2G25490.1	Zm00001d022530_P001	AT2G27050.1	14675533
AT2G25490.1	Zm00001d028974_P001	AT2G27050.1	14675533
AT2G25490.1	Zm00001d047563_P001	AT2G27050.1	14675533
AT2G25490.1	Zm00001d007188_P001	AT3G20770.1	14675532
AT2G25490.1	Zm00001d022530_P001	AT3G20770.1	14675532
AT2G25490.1	Zm00001d028974_P001	AT3G20770.1	14675532
AT2G25490.1	Zm00001d047563_P001	AT3G20770.1	14675532
AT2G25490.1	Zm00001d007188_P001	AT3G20770.1	14675533
AT2G25490.1	Zm00001d022530_P001	AT3G20770.1	14675533
AT2G25490.1	Zm00001d028974_P001	AT3G20770.1	14675533
AT2G25490.1	Zm00001d047563_P001	AT3G20770.1	14675533
AT2G25490.1	Zm00001d011238_P001	AT3G28715.1	21798944
AT2G25490.1	Zm00001d042193_P001	AT4G02570.1	14675533
AT5G25350.1	Zm00001d007188_P001	AT3G20770.1	14675532
AT5G25350.1	Zm00001d022530_P001	AT3G20770.1	14675532
AT5G25350.1	Zm00001d028974_P001	AT3G20770.1	14675532
AT5G25350.1	Zm00001d047563_P001	AT3G20770.1	14675532
AT5G25350.1	Zm00001d007188_P001	AT3G20770.1	14675533
AT5G25350.1	Zm00001d022530_P001	AT3G20770.1	14675533
AT5G25350.1	Zm00001d028974_P001	AT3G20770.1	14675533
AT5G25350.1	Zm00001d047563_P001	AT3G20770.1	14675533
AT5G25350.1	Zm00001d042193_P001	AT4G02570.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	95.02	93.28
Zm00001d053642_P001	Maize	cytosol	92.38	91.24
TraesCS6B01G210700.1	Wheat	cytosol	84.6	83.82
TraesCS6D01G169200.1	Wheat	cytosol	84.14	83.36
TraesCS6A01G181900.1	Wheat	cytosol	83.98	83.2
HORVU6Hr1G038430.3	Barley	plastid	82.58	81.32
Os02t0200900-01	Rice	cytosol	82.89	80.76
Zm00001d036880_P003	Maize	cytosol	67.19	58.7
Zm00001d000408_P001	Maize	cytosol	67.34	58.28
GSMUA_Achr6P05220_001	Banana	cytosol	55.05	54.13
GSMUA_Achr4P30680_001	Banana	cytosol	54.28	53.53
GSMUA_Achr9P28510_001	Banana	cytosol, nucleus, peroxisome	53.97	53.06
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	18.04	52.25
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	53.81	51.8
PGSC0003DMT400007545	Potato	cytosol	50.7	51.18
Zm00001d037295_P001	Maize	mitochondrion	19.28	50.82
Solyc12g009560.1.1	Tomato	cytosol	49.92	50.39
KRH03688	Soybean	cytosol	49.92	50.23
KRH20255	Soybean	cytosol	49.77	50.08
VIT_11s0016g05410.t01	Wine grape	cytosol	50.54	49.02
PGSC0003DMT400079445	Potato	cytosol, nucleus, peroxisome	48.83	48.91
Solyc07g008250.2.1	Tomato	cytosol, nucleus, peroxisome	48.37	48.52
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	17.57	48.5
KRH15886	Soybean	cytosol	48.06	47.98
KRH62989	Soybean	cytosol	48.37	47.85
VIT_04s0008g05470.t01	Wine grape	cytosol	49.61	47.83
GSMUA_Achr2P15920_001	Banana	cytosol, peroxisome, plastid	49.61	47.75
PGSC0003DMT400040977	Potato	nucleus	49.46	47.53
AT2G25490.1	Thale cress	plastid	46.35	47.45
Solyc08g060810.2.1	Tomato	plastid	48.99	47.37
KRH05167	Soybean	cytosol	44.63	47.05
CDX76980	Canola	cytosol	43.55	46.74
AT5G25350.1	Thale cress	cytosol	45.26	46.71
Bra034254.1-P	Field mustard	cytosol	44.95	46.46
Bra036542.1-P	Field mustard	cytosol	44.48	46.43
CDY35358	Canola	cytosol	44.95	46.39
CDX87090	Canola	cytosol	44.01	45.94
CDY19807	Canola	cytosol	44.01	45.94
CDX80503	Canola	cytosol	44.17	45.73
KRH61771	Soybean	cytosol	45.1	45.6
CDX88173	Canola	cytosol	44.01	45.5
Bra009835.1-P	Field mustard	cytosol	44.01	45.5
KRH52439	Soybean	cytosol, nucleus, peroxisome	45.1	45.45
KRH04870	Soybean	cytosol	19.13	45.22
PGSC0003DMT400094835	Potato	cytosol	16.33	42.86
PGSC0003DMT400089433	Potato	mitochondrion	30.48	42.7
PGSC0003DMT400042949	Potato	cytosol	36.08	42.03
Solyc06g049010.1.1	Tomato	plastid	39.35	40.81
Solyc06g030610.1.1	Tomato	cytosol	16.64	39.05
Solyc06g030620.1.1	Tomato	cytosol	11.82	37.81
Zm00001d051219_P001	Maize	cytosol	16.49	25.42
Zm00001d015974_P002	Maize	cytosol	13.53	24.3
Zm00001d007640_P001	Maize	cytosol	22.39	22.93
Zm00001d038224_P004	Maize	cytosol	12.75	22.28
Zm00001d048695_P001	Maize	cytosol	21.77	21.6
Zm00001d041635_P002	Maize	cytosol	22.24	21.57
Zm00001d023825_P001	Maize	cytosol	21.77	21.21
Zm00001d003103_P001	Maize	plastid	16.49	20.38
Zm00001d044622_P002	Maize	mitochondrion	22.24	20.31
Zm00001d005072_P003	Maize	mitochondrion	22.55	20.0
Zm00001d025808_P001	Maize	plastid	16.95	19.96
Zm00001d025812_P001	Maize	plastid	16.95	19.96
Zm00001d007294_P001	Maize	cytosol	12.6	19.95
Zm00001d019677_P001	Maize	cytosol	15.71	19.24
Zm00001d000224_P001	Maize	cytosol	12.91	19.17

Protein Annotations

EntrezGene:100194025	MapMan:11.5.2.6	MapMan:19.2.2.8.1.4.2	Gene3D:3.80.10.10	UniProt:A0A1D6H3X0	ProteinID:AQK69524.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF00646
PFAM:PF13516	PANTHER:PTHR44327	PANTHER:PTHR44327:SF3	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383
UniParc:UPI0002214E66	EnsemblPlantsGene:Zm00001d015778	EnsemblPlants:Zm00001d015778_P001	EnsemblPlants:Zm00001d015778_T001	SEG:seg	:

Description

EIN3-binding F-box protein 1

Coordinates

chr5:+:118613302..118616603

Molecular Weight (calculated)

68085.1 Da

IEP (calculated)

7.560

GRAVY (calculated)

0.256

Length

643 amino acids

Sequence
(BLAST)

001: MPALYAYGDD GCLVSAPAEL AGLFCRGAVQ QRKRTLVAAS AVAAAAAECV RAAKKQRQLP SLDALPDECL FEILRRVPGR RGAAACVSRR WLALLGSIRV
101: SEFGQAAAAA DTPSLPDLNE EFVMEEDKEE VPADRCVDRV LEGKEATDVR LAAMAVVAGS CGGLEKLSVR GSHPARGVTD QGLSAVARGS PNLSSLALWD
201: VPLITDAGLV EIAAGCPLLE RLDISRCPLI TDKGLAAFAQ GCPDLVSLTI EACSSVGDEG LRAIGRSCMK LQAVNIKNCP LVGDQGISSL VCSATASLAK
301: IRLQGLNITD ASLAVIGYYG KAITDLSLTR LATVGERGFW VMANAAGLQN LRCMSVTSCP GVTDLALASI AKFCPSLKKL YLRKCGHVSD AGLKAFTESA
401: KVFENLQLEE CNRVTLVGIL AFLNCSQKFR ALSLVKCMGI KDICSVPQLP FCRSLRFLTI KDCPGFTNAS LAVVGMICPQ LEQVDLSGLG EVTDNGLLPL
501: IQSSESGLIK VDLSGCKNIT DVAVSSLVKR HGKSLKKVSL EGCSKITDAS LFTMSESCTE LAELDLSNCM VSDYGVAMLA SARHLKLRVL SLSGCSKVTQ
601: KSVPFLGNLG QSLEGLNLQF CNMIGNHNIA SLEKKLWWCD ILA

Best Arabidopsis Sequence Match ( AT2G25490.1 )
(BLAST)

001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS

Arabidopsis Description

EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.