Factsheet for Zm00001d005072_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044622_P002	Maize	mitochondrion	85.52	88.07
KXG22793	Sorghum	nucleus	82.76	86.21
EES07863	Sorghum	nucleus	80.83	84.8
TraesCS5B01G149400.1	Wheat	mitochondrion	71.17	75.66
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	70.21	75.41
TraesCS5A01G150800.2	Wheat	mitochondrion	70.76	75.22
TraesCS5D01G155900.1	Wheat	mitochondrion	70.62	73.88
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	66.62	69.3
Os11t0108932-01	Rice	nucleus	28.97	67.31
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	54.76	55.6
GSMUA_Achr7P22290_001	Banana	cytosol	54.07	54.75
KRH76059	Soybean	cytosol, nucleus, peroxisome	49.66	53.65
VIT_08s0058g00700.t01	Wine grape	cytosol	48.69	53.24
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	47.86	52.18
Solyc10g076290.1.1	Tomato	cytosol	47.86	51.41
KRH65525	Soybean	cytosol, peroxisome, plastid	49.66	50.85
Bra005669.1-P	Field mustard	cytosol	46.48	50.45
AT5G01720.1	Thale cress	vacuole	46.21	50.38
VIT_06s0004g07520.t01	Wine grape	cytosol	45.93	50.3
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	46.48	49.85
CDX80753	Canola	endoplasmic reticulum	45.93	49.26
KRH17127	Soybean	cytosol	43.45	48.31
KRH72766	Soybean	cytosol	33.38	44.98
Zm00001d041635_P002	Maize	cytosol	35.72	39.06
Zm00001d023825_P001	Maize	cytosol	35.45	38.94
Zm00001d048695_P001	Maize	cytosol	34.48	38.58
Zm00001d007640_P001	Maize	cytosol	24.14	27.87
Zm00001d051219_P001	Maize	cytosol	15.72	27.34
Zm00001d015974_P002	Maize	cytosol	12.28	24.86
Zm00001d007294_P001	Maize	cytosol	13.66	24.38
Zm00001d015778_P001	Maize	cytosol	20.0	22.55
Zm00001d053642_P001	Maize	cytosol	20.0	22.27
Zm00001d038224_P004	Maize	cytosol	10.9	21.47
Zm00001d019677_P001	Maize	cytosol	15.17	20.95
Zm00001d003103_P001	Maize	plastid	14.9	20.77
Zm00001d000224_P001	Maize	cytosol	11.72	19.63
Zm00001d036880_P003	Maize	cytosol	19.86	19.57
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	5.93	19.37
Zm00001d000408_P001	Maize	cytosol	19.59	19.11
Zm00001d025812_P001	Maize	plastid	14.21	18.86
Zm00001d025808_P001	Maize	plastid	14.21	18.86
Zm00001d037295_P001	Maize	mitochondrion	6.34	18.85
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	5.66	17.6

Protein Annotations

EnsemblPlants:Zm00001d005072_P003	EnsemblPlants:Zm00001d005072_T003	EnsemblPlantsGene:Zm00001d005072	EntrezGene:103647160	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309	PANTHER:PTHR44309:SF3	PFAM:PF13516	ProteinID:ONM20096.1	SEG:seg
SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI0008455568	UniProt:A0A1D6EJ23	MapMan:35.1	:

Description

umc255aF-box/LRR-repeat protein 3

Coordinates

chr2:-:157224518..157228483

Molecular Weight (calculated)

78197.1 Da

IEP (calculated)

8.153

GRAVY (calculated)

0.219

Length

725 amino acids

Sequence
(BLAST)

001: MTMTAQQHRH PKRRCVALSL SPSLARIPGA PTPPLDSLAD ELLFLVLDRV AQADPRALKS FALASRACHA AESSHRRTLR PLRADLLPAA LARYPTATRL
101: DLTLCARVPD AALASAAVSG SSSALRAVDL SCSRGFSAAG VSELAVACPG LVDLDLSNGV DLGDAAAAEV ARARALRRLS LARWKPLTDM GLGCVAVGCT
201: ELRELSLKWC LGLTDLGIQL LALKCRKLTS LDLSYTMITK ASLPPIMKLP SLQELTLVGC IAIDDDALGS LERECSKSLQ VLHMSQCQNI TGVGVSSILK
301: SVPNLLELEL SYCCPVTPSM VRSFQKLAKL QTLKLEGSKF MADGLKAIGT SCASLRELSL SKSSGVTDTE LSFAVSRLKN LLKLDITCCR NITDVSLAAI
401: TSSCSSLISM RMESCSRVSS GALQLIGKHC SRLEELDLTD SDLDDEGLKA LARCSELSSL KIGICLKISD EGLTHIGRSC PKLREIDLYR CGGLSDDGII
501: QIAQSCPMLE SINLSYCTEI TDRSLISLSK CSKLNTLEIR GCPRVSSIGL SETAMGCRLL SKLDIKKCFG INDAGMLYLS QFSHSLRQIN LSYCSVTDIG
601: LLSLSCISGL QNMTIVHVAG ITPNGLAATL MVCGGLTKVK LHEAFRSMML PHMIKNVEAR GCVFQWIDKP FKVFYGSPEK LGSIQLCFVL PDLNAMLCSF
701: LCFQLRWNLV MYGSNSRKTC LYDEN

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.