CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07863	Sorghum	nucleus	91.38	92.04
Zm00001d044622_P002	Maize	mitochondrion	89.66	88.64
Zm00001d005072_P003	Maize	mitochondrion	86.21	82.76
TraesCS5B01G149400.1	Wheat	mitochondrion	75.57	77.13
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	74.57	76.89
TraesCS5A01G150800.2	Wheat	mitochondrion	75.14	76.69
TraesCS5D01G155900.1	Wheat	mitochondrion	74.28	74.6
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	72.7	72.6
Os11t0108932-01	Rice	nucleus	31.03	69.23
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	57.76	56.3
GSMUA_Achr7P22290_001	Banana	cytosol	56.9	55.31
VIT_08s0058g00700.t01	Wine grape	cytosol	51.87	54.45
KRH76059	Soybean	cytosol, nucleus, peroxisome	52.16	54.1
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	50.43	52.78
Solyc10g076290.1.1	Tomato	cytosol	50.43	52.0
KRH65525	Soybean	cytosol, peroxisome, plastid	52.44	51.55
Bra005669.1-P	Field mustard	cytosol	49.28	51.35
AT5G01720.1	Thale cress	vacuole	48.99	51.28
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	49.43	50.89
VIT_06s0004g07520.t01	Wine grape	cytosol	48.28	50.76
CDX80753	Canola	endoplasmic reticulum	48.71	50.15
KRH17127	Soybean	cytosol	44.68	47.7
KRH72766	Soybean	cytosol	34.48	44.61
KXG29052	Sorghum	plastid	37.5	39.55
KXG23663	Sorghum	cytosol	37.5	39.43
EES08900	Sorghum	cytosol	26.44	28.98
KXG30697	Sorghum	cytosol	15.95	26.3
EES09509	Sorghum	cytosol	14.08	25.39
EES04933	Sorghum	cytosol	12.64	25.21
EER90022	Sorghum	cytosol, plastid	20.11	22.36
EES18256	Sorghum	cytosol, nucleus, plastid	11.78	22.22
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	20.26	21.53
KXG26667	Sorghum	plastid	14.37	21.37
EES03986	Sorghum	cytosol	11.64	21.26
OQU89081	Sorghum	cytosol	15.8	20.95

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1B6PAU0	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KXG22793	ProteinID:KXG22793	ProteinID:KXG22793.1	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516	PANTHER:PTHR44309	PANTHER:PTHR44309:SF3	SMART:SM00367
EnsemblPlantsGene:SORBI_3008G008400	SUPFAM:SSF52047	UniParc:UPI00081AB9A8	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:651898..655788

Molecular Weight (calculated)

75057.0 Da

IEP (calculated)

8.208

GRAVY (calculated)

0.126

Length

696 amino acids

Sequence
(BLAST)

001: MAAAASHHHQ QQQQHRHPKR RRLALSPSPT PTPAAAVPPL DSLADELLFL VLDRVAQADP RALKSFALAS RACHAAESRH RRTLRPLRAD LLPAALARYP
101: SATRLDLSLC ARVPDAALAS AVSGSSSSAL RAVDLSRSRG FGAAGVAALA ASCRGLADLD LSNGVHLGDA AAAEVARARG LRRLSLARWK PLTDMGLGCV
201: AVGCTELREL SLKWCLGLSD LGIQLLALKC RKLTSLDLSY TMITKDSFPP IMKLPNLQEL TLVGCIGIDD DAFGSLGEEC SKSLQVLDLS QCQNITDVGV
301: SSILKSVPNL LELDLSYCCP VTPCMVRSFQ KIPKLQTLKL EGCKFMAYAL KAIGTSCVSL RELSLSKCSG VTDTELSFAV SRLKNLLKLD ITCCRNITDV
401: SLAAITSSCS SLISLKMESC SHVSSGALQL IGKHCSHLEE LDLTDSDLDD EGLKALSRCS KLSSLKVGIC LKISDEGLTH IGRSCPKLRE IDLYRCGGLS
501: DDGIIQIAQG CPKLESMNLS YCTEITDRSL ISLSKCTKLN TLEIRGCPMI TSTGLSEIAM GCRLLSKLDI KKCFEINDAG MLYLSQFSHS LRQINLSYCS
601: VTDIGLLSLS GISGLQNMTI VHLAGMTPNG LMATLMVCGG LTKVKLHEAF KSMVPPHMIK NVQARGCVFQ WIDKPFKVEV EPCDVWKQQS QDVLVR

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.