CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus
Any Predictor:	cytosol, endoplasmic reticulum, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005669.1-P	Field mustard	cytosol	98.37	99.55
CDX80753	Canola	endoplasmic reticulum	96.89	96.89
AT5G01720.1	Thale cress	vacuole	85.8	87.22
VIT_08s0058g00700.t01	Wine grape	cytosol	63.61	64.86
KRH76059	Soybean	cytosol, nucleus, peroxisome	61.54	62.0
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	60.5	61.5
Solyc10g076290.1.1	Tomato	cytosol	60.95	61.04
KRH65525	Soybean	cytosol, peroxisome, plastid	62.87	60.03
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	54.44	51.54
GSMUA_Achr7P22290_001	Banana	cytosol	53.4	50.42
KXG22793	Sorghum	nucleus	50.89	49.43
EES07863	Sorghum	nucleus	49.85	48.77
Zm00001d044622_P002	Maize	mitochondrion	50.74	48.72
TraesCS5A01G150800.2	Wheat	mitochondrion	48.96	48.53
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	49.56	48.06
TraesCS5B01G149400.1	Wheat	mitochondrion	48.22	47.8
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	47.49	47.56
TraesCS5D01G155900.1	Wheat	mitochondrion	47.78	46.61
Zm00001d005072_P003	Maize	mitochondrion	49.85	46.48
Os11t0108932-01	Rice	nucleus	20.86	45.19
CDY53337	Canola	cytosol	35.5	37.56
CDX88253	Canola	cytosol	35.21	37.19
CDX80608	Canola	cytosol	35.06	37.03
CDY19741	Canola	cytosol	33.58	36.79
CDY46953	Canola	cytosol	17.01	27.98
CDY40798	Canola	cytosol	16.86	27.74
CDX88014	Canola	cytosol	16.57	27.65
CDX88336	Canola	cytosol	12.57	26.23
CDX90588	Canola	cytosol	23.52	25.28
CDY09760	Canola	cytosol	23.37	25.2
CDX87549	Canola	cytosol	13.17	25.07
CDX71945	Canola	cytosol	13.02	24.93
CDY06032	Canola	cytosol	13.02	24.93
CDY28039	Canola	cytosol	14.35	24.87
CDX79184	Canola	cytosol	13.02	24.51
CDX68067	Canola	cytosol	12.87	24.23
CDY35942	Canola	cytosol	14.05	24.05
CDX96592	Canola	cytosol	12.72	23.76
CDY67973	Canola	plasma membrane	12.57	23.48
CDX88173	Canola	cytosol	21.6	23.47
CDY35358	Canola	cytosol	21.6	23.43
CDX80503	Canola	cytosol	21.3	23.19
CDX76980	Canola	cytosol	20.27	22.87
CDX87090	Canola	cytosol	20.41	22.4
CDY19807	Canola	cytosol	20.27	22.24
CDY25663	Canola	plastid	15.98	21.01
CDY43846	Canola	plastid	15.83	20.82
CDY58588	Canola	extracellular	3.99	20.45
CDX83114	Canola	cytosol	14.79	20.12
CDX68575	Canola	cytosol	15.09	19.96
CDY58589	Canola	extracellular	3.85	19.85
CDY45764	Canola	cytosol, peroxisome, plastid	16.72	19.38
CDX81326	Canola	cytosol	14.5	18.7
CDY18646	Canola	cytosol	14.35	18.51
CDY29091	Canola	plastid	4.73	18.5
CDY12824	Canola	nucleus	15.53	9.63
CDY01426	Canola	cytosol	15.38	9.6

Protein Annotations

EnsemblPlants:CDY11182	EnsemblPlantsGene:GSBRNA2T00049197001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309
PANTHER:PTHR44309:SF3	PFAM:PF13516	ProteinID:CDY11182	ProteinID:CDY11182.1	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI0004EDF628	UniProt:A0A078FDV9	MapMan:35.1	:	:

Description

BnaA03g00180DBnaA03g00180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDV9]

Coordinates

chrLK032010:+:67458..70290

Molecular Weight (calculated)

73581.0 Da

IEP (calculated)

8.154

GRAVY (calculated)

0.151

Length

676 amino acids

Sequence
(BLAST)

001: MKKAKQIQDM ISKPFDLLSE ELVFIILDLV AQNPSDLKSF SLTCKWFYQV EARHRRSLKP LRAEYLPRIL TRYRNTADLD LSFCPRVTDY ALSVVGCLSG
101: PTLRSVDLSR SFSFSAAGLL RLAVKCVSLV EIDLSNATEM RDAAAAVVAE AKSLERLKLG RCKKLTDMGI GCIAVGCRKL KRVSLKWCVG VGDLGVGLLA
201: VKCKDIRSLD LSYLPITGKC LHDVLKLQHL EELLLQGCFG VDDDSLKSLA HHCNSLKNLD ASSCQNLTQR GLTSLLSGAG CLERLDLAHS SSVISLDFAS
301: SLNKVSSALQ SIRLDGCAVT CDGLKAIGTL CISLREVSLS KCVTVTDEGL SCLVMKLKDL RKLDITCCRK LTGVSITQVA SSCPLLVSLK MESCSLVSRD
401: AFWLIGHKCR LLEELDFTDN EIDDEGLKSI SSCRSLSSLK LGICLNITDR GLSYIGMGCS NLRELDLYRS VGITDVGISS IAQGCCHLET INISYCKDIT
501: DKSLVSLSKC SMLQTFESRG CPHITCQGLA AIAVRCKRLS KLDLKKCPFI NDSGLLTLAH FSQGLKQISV SETGVTDVGL VSLANIGCLQ NIAAVNTRGL
601: SPSGVAAALV GCGGLRKVKL HASLRSLLPS SLINHMEARG CSFLWKDYNN HNNSNTLQAE LDPKYWKLQL EEDIEL

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.