CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036607.1-P	Field mustard	cytosol	96.76	93.43
CDY53337	Canola	cytosol	95.79	92.49
CDX88253	Canola	cytosol	86.71	83.59
CDX80608	Canola	cytosol	86.06	82.97
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	84.12	80.84
KRH68483	Soybean	cytosol	58.67	56.47
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	58.67	56.3
KRG96764	Soybean	cytosol	58.02	55.85
Solyc01g099970.2.1	Tomato	extracellular	52.35	52.18
PGSC0003DMT400063732	Potato	cytosol	54.13	52.11
Os12t0552700-01	Rice	cytosol, peroxisome	28.53	47.19
GSMUA_Achr6P20450_001	Banana	cytosol	50.24	46.97
Zm00001d041635_P002	Maize	cytosol	50.41	46.91
KXG23663	Sorghum	cytosol	50.08	46.68
Zm00001d023825_P001	Maize	cytosol	49.27	46.06
GSMUA_Achr11P...	Banana	cytosol	48.78	45.88
TraesCS5A01G091800.2	Wheat	cytosol	48.95	45.69
TraesCS5B01G097800.2	Wheat	cytosol	48.78	45.54
Zm00001d048695_P001	Maize	cytosol	47.81	45.52
TraesCS5D01G103900.3	Wheat	cytosol	48.95	45.35
KXG29052	Sorghum	plastid	48.46	45.3
HORVU5Hr1G024060.1	Barley	cytosol, plastid	48.95	35.82
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	36.79	33.58
CDX80753	Canola	endoplasmic reticulum	36.79	33.58
CDX88014	Canola	cytosol	18.8	28.64
CDY46953	Canola	cytosol	18.48	27.74
CDY40798	Canola	cytosol	18.15	27.25
CDY06032	Canola	cytosol	15.07	26.35
CDX71945	Canola	cytosol	14.91	26.06
CDY09760	Canola	cytosol	23.82	23.45
CDX90588	Canola	cytosol	23.82	23.37
CDX88336	Canola	cytosol	12.16	23.15
CDY28039	Canola	cytosol	14.42	22.82
CDY58588	Canola	extracellular	4.86	22.73
CDY35942	Canola	cytosol	14.1	22.03
CDX79184	Canola	cytosol	12.48	21.45
CDX87549	Canola	cytosol	12.32	21.41
CDY29091	Canola	plastid	6.0	21.39
CDX88173	Canola	cytosol	21.39	21.22
CDY35358	Canola	cytosol	21.39	21.19
CDX76980	Canola	cytosol	20.42	21.04
CDX68067	Canola	cytosol	12.16	20.89
CDX87090	Canola	cytosol	20.75	20.78
CDX80503	Canola	cytosol	20.75	20.61
CDY58589	Canola	extracellular	4.38	20.61
CDY67973	Canola	plasma membrane	11.99	20.44
CDX96592	Canola	cytosol	11.99	20.44
CDX68575	Canola	cytosol	16.86	20.35
CDY19807	Canola	cytosol	20.26	20.29
CDY45764	Canola	cytosol, peroxisome, plastid	19.12	20.24
CDX83114	Canola	cytosol	16.21	20.12
CDY25663	Canola	plastid	16.69	20.04
CDY43846	Canola	plastid	16.53	19.84
CDY18646	Canola	cytosol	15.88	18.7
CDX81326	Canola	cytosol	15.72	18.51
CDY12824	Canola	nucleus	16.37	9.27
CDY01426	Canola	cytosol	16.21	9.23

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078G332	EnsemblPlants:CDY19741	ProteinID:CDY19741	ProteinID:CDY19741.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00009479001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516	PANTHER:PTHR44309	PANTHER:PTHR44309:SF2
SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI0004EDC420	SEG:seg	:	:

Description

BnaA09g03940DBnaA09g03940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G332]

Coordinates

chrLK032100:-:166598..169842

Molecular Weight (calculated)

68213.5 Da

IEP (calculated)

7.943

GRAVY (calculated)

0.129

Length

617 amino acids

Sequence
(BLAST)

001: MPLSPSILSV LSEDLLVRVY GFLDPPCRKK WRLVSKEFHR VDSLSRTSIR ILRVEFLPAL LSNYPHLSSL DLSVCPKLDD DVVLRLASYG AVSVKSLNLS
101: RATALRARGL ETLARLCRGL ERVDVSHCWG FGDREAAALS VAAGLREVRL DKCLSLSDVG LARIVLGCSN LSKISLKWCM EISDLGIDLL CKKCKDLKSL
201: DVSYLKITND SIRSIALLLK LEVLEMVNCP LVDDDGLQYL ENGCPSLQEI DVTRCERSLC IRSITELLTK HQSSKHLKTL WIDGARVSDS SLLTLSSSCR
301: SLTDIGVSKC VGVTDIGITG LARNCINLKT LNLACCGFVT DAAISAVAQS CRNLETLKLE SCHMITEKGL QSLGCYSKHL QELDLTDCYG VNDRGLEYIS
401: KCSNLLRLKL GLCTNISDKG MFHIGSKCSK LLELDLYRCG GFGDDGLAAI SRGCKSLNRL IISYCGELTD AGVEQIRQLE HLSYLELRGL KNITGAGLAA
501: VACGCQKLDY LDLKKCENID DSGFWALAYF ARNLRQINLC YCSVSDTALC MLMSNLSRVQ DVDLVNLNRV TVEGSEFALR ACCNRLKKLK LFAPLRFLLS
601: SELLEMLHAR GCRIRWD

Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)

001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD

Arabidopsis Description

At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [extracellular,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.