Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0636400-01 | Rice | cytosol | 32.95 | 28.5 |
| CDX88014 | Canola | cytosol | 49.71 | 21.23 |
| AT5G23340.1 | Thale cress | cytosol | 45.66 | 19.51 |
| CDY40798 | Canola | cytosol | 46.24 | 19.46 |
| VIT_10s0071g00310.t01 | Wine grape | cytosol | 45.66 | 19.13 |
| CDY46953 | Canola | cytosol | 45.09 | 18.98 |
| GSMUA_Achr8P13910_001 | Banana | mitochondrion | 34.1 | 16.67 |
| TraesCS6D01G216400.1 | Wheat | cytosol | 39.88 | 16.55 |
| KRG90608 | Soybean | cytosol | 39.88 | 16.51 |
| TraesCS6B01G262900.1 | Wheat | cytosol | 39.31 | 16.31 |
| TraesCS6A01G234100.2 | Wheat | cytosol | 39.31 | 16.31 |
| KRH36149 | Soybean | cytosol | 39.31 | 16.23 |
| Solyc04g008980.2.1 | Tomato | cytosol | 39.31 | 16.19 |
| PGSC0003DMT400029999 | Potato | cytosol | 38.73 | 16.03 |
| GSMUA_Achr5P19410_001 | Banana | cytosol | 39.31 | 16.0 |
| HORVU6Hr1G059950.1 | Barley | cytosol | 38.15 | 15.83 |
| Zm00001d051219_P001 | Maize | cytosol | 36.99 | 15.35 |
| KXG30697 | Sorghum | cytosol | 35.84 | 14.69 |
| CDY45764 | Canola | cytosol, peroxisome, plastid | 49.13 | 14.58 |
| KRH16153 | Soybean | cytosol | 17.34 | 12.1 |
| CDY19741 | Canola | cytosol | 21.39 | 6.0 |
| CDX71945 | Canola | cytosol | 12.14 | 5.95 |
| CDY53337 | Canola | cytosol | 21.97 | 5.95 |
| CDY06032 | Canola | cytosol | 11.56 | 5.67 |
| CDX88253 | Canola | cytosol | 20.23 | 5.47 |
| CDY43846 | Canola | plastid | 16.18 | 5.45 |
| CDY25663 | Canola | plastid | 16.18 | 5.45 |
| CDY09760 | Canola | cytosol | 19.65 | 5.42 |
| CDX90588 | Canola | cytosol | 19.65 | 5.41 |
| CDY28039 | Canola | cytosol | 12.14 | 5.38 |
| CDY35942 | Canola | cytosol | 12.14 | 5.32 |
| CDX80608 | Canola | cytosol | 19.65 | 5.31 |
| CDX83114 | Canola | cytosol | 13.87 | 4.83 |
| CDY11182 | Canola | cytosol, endoplasmic reticulum, nucleus | 18.5 | 4.73 |
| CDX88336 | Canola | cytosol | 8.67 | 4.63 |
| CDX80753 | Canola | endoplasmic reticulum | 17.92 | 4.59 |
| CDX87549 | Canola | cytosol | 9.25 | 4.51 |
| CDX68575 | Canola | cytosol | 13.29 | 4.5 |
| CDX79184 | Canola | cytosol | 9.25 | 4.46 |
| CDY18646 | Canola | cytosol | 13.29 | 4.39 |
| CDX81326 | Canola | cytosol | 13.29 | 4.39 |
| CDX68067 | Canola | cytosol | 8.67 | 4.18 |
| CDY19807 | Canola | cytosol | 14.45 | 4.06 |
| CDX87090 | Canola | cytosol | 14.45 | 4.06 |
| CDX88173 | Canola | cytosol | 14.45 | 4.02 |
| CDX96592 | Canola | cytosol | 8.09 | 3.87 |
| CDY67973 | Canola | plasma membrane | 8.09 | 3.87 |
| CDX80503 | Canola | cytosol | 13.29 | 3.7 |
| CDY35358 | Canola | cytosol | 13.29 | 3.69 |
| CDY58589 | Canola | extracellular | 2.31 | 3.05 |
| CDY58588 | Canola | extracellular | 2.31 | 3.03 |
| CDX76980 | Canola | cytosol | 10.4 | 3.01 |
| CDY01426 | Canola | cytosol | 13.87 | 2.22 |
| CDY12824 | Canola | nucleus | 13.87 | 2.2 |
Protein Annotations
| EnsemblPlants:CDY29091 | EnsemblPlantsGene:GSBRNA2T00041846001 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp |
| PANTHER:PTHR45191 | ProteinID:CDY29091 | ProteinID:CDY29091.1 | SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI0004EEE666 |
| UniProt:A0A078GU97 | MapMan:35.2 | : | : | : | : |
Description
BnaC09g18170DBnaC09g18170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU97]
Coordinates
chrLK032230:+:28527..32569
Molecular Weight (calculated)
19330.5 Da
IEP (calculated)
8.298
GRAVY (calculated)
0.015
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MCCCSVGDSS FSVASAKSIV LELHSRVCSH RTSLKTLKLL DCYKVGDESV SSLAQFCKNL ETLIIGGCRD ISDESIILLA DSCRDGLKNL RMDWQVTCQS
101: SVDCRECTNL LVDSAHCHLG ELSFEYLVKI NFLKDASKTQ KKVRVYMRKL NTRSPIPKST LFGTLRNSVV FVY
101: SVDCRECTNL LVDSAHCHLG ELSFEYLVKI NFLKDASKTQ KKVRVYMRKL NTRSPIPKST LFGTLRNSVV FVY
001: MSSVCVNEAL TDDELRWVLS RLDSDKDKEV FGLVCKRWLN LQSTDRKKLA ARAGPHMLRR LASRFTQIVE LDLSQSISRS FYPGVTDSDL AVISEGFKFL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL
Arabidopsis Description
At5g23340/MKD15_20 [Source:UniProtKB/TrEMBL;Acc:Q9FMW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.