Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G262900.1 | Wheat | cytosol | 81.0 | 38.85 |
| TraesCS6D01G216400.1 | Wheat | cytosol | 80.0 | 38.37 |
| TraesCS6A01G234100.2 | Wheat | cytosol | 80.0 | 38.37 |
| HORVU6Hr1G059950.1 | Barley | cytosol | 80.0 | 38.37 |
| Zm00001d051219_P001 | Maize | cytosol | 78.5 | 37.65 |
| KXG30697 | Sorghum | cytosol | 75.0 | 35.55 |
| CDY29091 | Canola | plastid | 28.5 | 32.95 |
| GSMUA_Achr8P13910_001 | Banana | mitochondrion | 57.5 | 32.49 |
| GSMUA_Achr5P19410_001 | Banana | cytosol | 62.0 | 29.18 |
| VIT_10s0071g00310.t01 | Wine grape | cytosol | 56.0 | 27.12 |
| Bra009671.1-P | Field mustard | cytosol | 54.5 | 26.91 |
| CDX88014 | Canola | cytosol | 54.5 | 26.91 |
| CDY46953 | Canola | cytosol | 54.0 | 26.28 |
| Bra029367.1-P | Field mustard | cytosol | 54.0 | 26.28 |
| CDY40798 | Canola | cytosol | 54.0 | 26.28 |
| AT5G23340.1 | Thale cress | cytosol | 53.0 | 26.17 |
| Solyc04g008980.2.1 | Tomato | cytosol | 52.5 | 25.0 |
| KRH36149 | Soybean | cytosol | 51.5 | 24.58 |
| KRG90608 | Soybean | cytosol | 51.0 | 24.4 |
| PGSC0003DMT400029999 | Potato | cytosol | 51.0 | 24.4 |
| CDY45764 | Canola | cytosol, peroxisome, plastid | 54.0 | 18.52 |
| KRH16153 | Soybean | cytosol | 22.5 | 18.15 |
| Os12t0552700-01 | Rice | cytosol, peroxisome | 27.5 | 14.75 |
| Os02t0281150-01 | Rice | cytosol | 19.5 | 10.96 |
| Os04t0505700-01 | Rice | cytosol, mitochondrion | 21.5 | 10.36 |
| Os06t0605900-01 | Rice | cytosol | 26.5 | 8.45 |
| Os02t0200900-01 | Rice | cytosol | 25.5 | 7.73 |
| Os05t0425700-01 | Rice | cytosol | 14.0 | 7.45 |
| Os01t0881900-01 | Rice | cytosol | 14.0 | 7.39 |
| Os11t0264200-01 | Rice | cytosol | 13.5 | 7.09 |
| Os12t0108500-01 | Rice | cytosol, plasma membrane, plastid | 24.5 | 7.03 |
| Os10t0148800-01 | Rice | cytosol | 13.0 | 5.22 |
| Os09t0113000-01 | Rice | cytosol, nucleus | 1.5 | 3.7 |
| Os11t0641200-01 | Rice | cytosol | 2.0 | 1.12 |
| Os11t0108932-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.2 | ProteinID:BAF09437.1 | ProteinID:BAS79943.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp |
| EnsemblPlantsGene:Os02g0636400 | EnsemblPlants:Os02t0636400-01 | PFAM:PF13516 | PANTHER:PTHR45191 | UniProt:Q0DZA1 | SMART:SM00367 |
| SUPFAM:SSF52047 | UniParc:UPI0000DF07C8 | SEG:seg | : | : | : |
Description
Leucine-rich repeat, cysteine-containing subtype containing protein. (Os02t0636400-01)
Coordinates
chr2:-:25514509..25515465
Molecular Weight (calculated)
21614.2 Da
IEP (calculated)
6.674
GRAVY (calculated)
0.225
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: KCNKVGDPGV CKFAEVSSSS LVSLKLLDCN KVGDKSIHAL AKFCHNLETL VIGGCRDVTD ASIEALAFAC YSRLKCLRMD WCLKITDSSL RSLLSNCKLL
101: VAIDVGCCDQ ITDAAFQDMD ANGFQSALRL LKISSCVRIT VAGVRNVIES CMALEHLDVR SCPQVTRQSC EQAGLQFPGS CKVNFEGSLS ESDPSVAIFF
101: VAIDVGCCDQ ITDAAFQDMD ANGFQSALRL LKISSCVRIT VAGVRNVIES CMALEHLDVR SCPQVTRQSC EQAGLQFPGS CKVNFEGSLS ESDPSVAIFF
001: MSSVCVNEAL TDDELRWVLS RLDSDKDKEV FGLVCKRWLN LQSTDRKKLA ARAGPHMLRR LASRFTQIVE LDLSQSISRS FYPGVTDSDL AVISEGFKFL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL
Arabidopsis Description
At5g23340/MKD15_20 [Source:UniProtKB/TrEMBL;Acc:Q9FMW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.