Factsheet for Os02t0200900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0587000-01
Os01t0935300-02
Os02t0689132-00
Os05t0193900-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25490.1	Os02t0689132-00	AT2G27050.1	14675533
AT2G25490.1	Os02t0689132-00	AT3G20770.1	14675532
AT2G25490.1	Os02t0689132-00	AT3G20770.1	14675533
AT2G25490.1	Os01t0587000-01	AT3G28715.1	21798944
AT2G25490.1	Os01t0935300-02	AT4G02570.1	14675533
AT2G25490.1	Os05t0193900-00	AT4G02570.1	14675533
AT5G25350.1	Os02t0689132-00	AT3G20770.1	14675532
AT5G25350.1	Os02t0689132-00	AT3G20770.1	14675533
AT5G25350.1	Os01t0935300-02	AT4G02570.1	14675533
AT5G25350.1	Os05t0193900-00	AT4G02570.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	84.24	84.89
TraesCS6B01G210700.1	Wheat	cytosol	81.67	83.05
Zm00001d053642_P001	Maize	cytosol	81.82	82.95
Zm00001d015778_P001	Maize	cytosol	80.76	82.89
TraesCS6A01G181900.1	Wheat	cytosol	81.21	82.59
TraesCS6D01G169200.1	Wheat	cytosol	81.06	82.43
HORVU6Hr1G038430.3	Barley	plastid	80.76	81.62
Os06t0605900-01	Rice	cytosol	65.0	68.42
GSMUA_Achr6P05220_001	Banana	cytosol	51.36	51.83
GSMUA_Achr4P30680_001	Banana	cytosol	50.76	51.38
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	51.52	50.9
GSMUA_Achr9P28510_001	Banana	cytosol, nucleus, peroxisome	50.15	50.61
PGSC0003DMT400007545	Potato	cytosol	47.73	49.45
Solyc12g009560.1.1	Tomato	cytosol	47.27	48.98
KRH03688	Soybean	cytosol	47.27	48.83
KRH20255	Soybean	cytosol	47.12	48.67
PGSC0003DMT400079445	Potato	cytosol, nucleus, peroxisome	47.27	48.6
VIT_11s0016g05410.t01	Wine grape	cytosol	48.79	48.57
KRH15886	Soybean	cytosol	47.27	48.45
Solyc07g008250.2.1	Tomato	cytosol, nucleus, peroxisome	46.82	48.21
VIT_04s0008g05470.t01	Wine grape	cytosol	48.33	47.83
PGSC0003DMT400040977	Potato	nucleus	48.03	47.38
KRH05167	Soybean	cytosol	43.79	47.38
Bra036542.1-P	Field mustard	cytosol	44.09	47.24
AT5G25350.1	Thale cress	cytosol	44.55	47.19
KRH62989	Soybean	cytosol	46.36	47.08
GSMUA_Achr2P15920_001	Banana	cytosol, peroxisome, plastid	47.58	47.01
Solyc08g060810.2.1	Tomato	plastid	47.27	46.92
CDX88173	Canola	cytosol	44.09	46.78
CDY19807	Canola	cytosol	43.64	46.75
CDX80503	Canola	cytosol	43.94	46.7
Bra009835.1-P	Field mustard	cytosol	43.79	46.46
CDX87090	Canola	cytosol	43.33	46.43
KRH52439	Soybean	cytosol, nucleus, peroxisome	44.55	46.08
KRH61771	Soybean	cytosol	44.39	46.07
CDX76980	Canola	cytosol	41.06	45.24
Bra034254.1-P	Field mustard	cytosol	42.58	45.18
CDY35358	Canola	cytosol	42.27	44.78
AT2G25490.1	Thale cress	plastid	42.58	44.75
KRH04870	Soybean	cytosol	18.33	44.49
PGSC0003DMT400089433	Potato	mitochondrion	29.7	42.7
PGSC0003DMT400042949	Potato	cytosol	35.0	41.85
PGSC0003DMT400094835	Potato	cytosol	15.45	41.63
Solyc06g049010.1.1	Tomato	plastid	38.03	40.48
Solyc06g030620.1.1	Tomato	cytosol	11.36	37.31
Solyc06g030610.1.1	Tomato	cytosol	15.3	36.86
Os02t0636400-01	Rice	cytosol	7.73	25.5
Os11t0264200-01	Rice	cytosol	13.94	24.15
Os02t0281150-01	Rice	cytosol	12.27	22.75
Os12t0552700-01	Rice	cytosol, peroxisome	12.73	22.52
Os04t0505700-01	Rice	cytosol, mitochondrion	13.79	21.93
Os05t0425700-01	Rice	cytosol	11.97	21.01
Os11t0641200-01	Rice	cytosol	11.36	20.95
Os01t0881900-01	Rice	cytosol	11.97	20.84
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	21.82	20.66
Os11t0108932-01	Rice	nucleus	9.09	19.23
Os10t0148800-01	Rice	cytosol	13.79	18.27
Os09t0113000-01	Rice	cytosol, nucleus	0.91	7.41

Protein Annotations

MapMan:11.5.2.6	MapMan:19.2.2.8.1.4.2	Gene3D:3.80.10.10	EntrezGene:4328647	ProteinID:BAD15849.1	ProteinID:BAS77513.1
ProteinID:EAZ22129.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
EnsemblPlantsGene:Os02g0200900	EnsemblPlants:Os02t0200900-01	PFAM:PF00646	PFAM:PF13516	PANTHER:PTHR44327	PANTHER:PTHR44327:SF3
UniProt:Q6Z796	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0000358BB1	RefSeq:XP_015624671.1
SEG:seg	:	:	:	:	:

Description

F-box protein 72Hypothetical conserved gene. (Os02t0200900-01);Leucine-rich repeat, cysteine-containing containing protein. (Os02t0200900-02);Hypothetical conserved gene. (Os02t0200900-03);Similar to F-box family member. (Os02t0200900-04)

Coordinates

chr2:-:5628122..5631254

Molecular Weight (calculated)

69736.9 Da

IEP (calculated)

7.272

GRAVY (calculated)

0.207

Length

660 amino acids

Sequence
(BLAST)

001: MVAFYGLGDG GCLVSAPAEL AGMFCRGGVV VQQQQRKRSL VAASAVAAAD CVVRAAKRQR QQRQPPSLDA LPDECLFEVL RRLPGGRERG ASACVSRRWL
101: ALLCSIRASE LNQATAAAAA AAPPSLPDLN EEFVMEEDDE EEESSPVVDP CVERVLEGKE ATDVRLAAMA VVAGSRRGLE KLAVRGSHPT RGVTDRGLLA
201: VARGSPNLCS LALWDVPLVT DAGLAEIAAG CPSLERLDIT RCPLITDKGL AAVAHGCPNL LSLTVESCSG VGNDGLRAIG RSCSKIQALN IKNCARIGDQ
301: GISSLVCSAT ASLTKIRLQG LNITDASLAL IGYYGKAVTD LTLVRLPVVA ERGFWVMANA AGLQNLRCMS VTSCPGVTNL ALAAIAKFCP SLRQLSFRKC
401: GHMTDAGLKA FTESARLLES LQLEECNGVT LVGILDFLVN CGPKFRSLSL VKCMGIKDIC STPAQLPLCK SLQFLTIKDC PDFTDASLAV VGMVCPYLEQ
501: VDLSGLREVT DRGLLPLINS SEGGLVKVDL SGCKNITDAA VSTLVKGHGK SLKQVSLEGC SKITDASLFA ISENCTELAE LDLSKCMVSD NGVATLASAK
601: HLKLRVLSLS GCSKVTPKSV SFLGNMGQSL EGLNLQFCNM IGNHNIASLE KQLWWCDILA

Best Arabidopsis Sequence Match ( AT2G25490.1 )
(BLAST)

001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS

Arabidopsis Description

EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.