Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 94.34 | 94.04 |
| KRH15886 | Soybean | cytosol | 72.48 | 71.58 |
| KRH05167 | Soybean | cytosol | 66.82 | 69.67 |
| VIT_04s0008g05470.t01 | Wine grape | cytosol | 64.78 | 61.77 |
| PGSC0003DMT400040977 | Potato | nucleus | 61.16 | 58.15 |
| KRH20255 | Soybean | cytosol | 57.55 | 57.28 |
| KRH03688 | Soybean | cytosol | 57.55 | 57.28 |
| Solyc08g060810.2.1 | Tomato | plastid | 59.59 | 56.99 |
| AT2G25490.1 | Thale cress | plastid | 55.97 | 56.69 |
| AT5G25350.1 | Thale cress | cytosol | 55.19 | 56.34 |
| CDX87090 | Canola | cytosol | 54.56 | 56.33 |
| Bra036542.1-P | Field mustard | cytosol | 54.25 | 56.01 |
| Bra034254.1-P | Field mustard | cytosol | 54.56 | 55.79 |
| CDY19807 | Canola | cytosol | 53.93 | 55.68 |
| CDX76980 | Canola | cytosol | 52.2 | 55.43 |
| CDY35358 | Canola | cytosol | 53.93 | 55.06 |
| KRH62989 | Soybean | cytosol | 55.97 | 54.77 |
| CDX88173 | Canola | cytosol | 53.46 | 54.66 |
| Bra009835.1-P | Field mustard | cytosol | 53.14 | 54.34 |
| CDX80503 | Canola | cytosol | 52.99 | 54.27 |
| GSMUA_Achr4P30680_001 | Banana | cytosol | 52.52 | 51.23 |
| GSMUA_Achr9P28510_001 | Banana | cytosol, nucleus, peroxisome | 52.2 | 50.76 |
| PGSC0003DMT400089433 | Potato | mitochondrion | 36.32 | 50.33 |
| GSMUA_Achr6P05220_001 | Banana | cytosol | 51.73 | 50.31 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 51.73 | 49.25 |
| GSMUA_Achr2P15920_001 | Banana | cytosol, peroxisome, plastid | 50.63 | 48.2 |
| PGSC0003DMT400042949 | Potato | cytosol | 41.2 | 47.46 |
| PGSC0003DMT400094835 | Potato | cytosol | 18.08 | 46.94 |
| Solyc06g049010.1.1 | Tomato | plastid | 45.75 | 46.94 |
| KRH04870 | Soybean | cytosol | 19.97 | 46.69 |
| HORVU7Hr1G090240.1 | Barley | cytosol | 39.31 | 46.38 |
| HORVU1Hr1G089690.1 | Barley | cytosol, extracellular, mitochondrion | 19.03 | 45.49 |
| EES06473 | Sorghum | cytosol, peroxisome, plasma membrane | 46.7 | 45.34 |
| Solyc06g030610.1.1 | Tomato | cytosol | 19.5 | 45.26 |
| Zm00001d053642_P001 | Maize | cytosol | 46.23 | 45.16 |
| TraesCS6D01G169200.1 | Wheat | cytosol | 46.07 | 45.15 |
| TraesCS6B01G210700.1 | Wheat | cytosol | 46.07 | 45.15 |
| Zm00001d015778_P001 | Maize | cytosol | 45.6 | 45.1 |
| EER90022 | Sorghum | cytosol, plastid | 44.34 | 45.05 |
| TraesCS6A01G181900.1 | Wheat | cytosol | 45.75 | 44.84 |
| HORVU6Hr1G038430.3 | Barley | plastid | 45.6 | 44.41 |
| Os02t0200900-01 | Rice | cytosol | 46.07 | 44.39 |
| TraesCS7D01G373800.1 | Wheat | cytosol | 44.97 | 43.93 |
| TraesCS7B01G278800.1 | Wheat | cytosol | 44.65 | 43.89 |
| Solyc06g030620.1.1 | Tomato | cytosol | 13.84 | 43.78 |
| TraesCS7A01G377500.1 | Wheat | cytosol | 44.18 | 43.3 |
| Os06t0605900-01 | Rice | cytosol | 42.61 | 43.22 |
| Zm00001d036880_P003 | Maize | cytosol | 43.55 | 37.64 |
| HORVU5Hr1G000950.4 | Barley | plastid | 26.1 | 37.14 |
| HORVU5Hr1G029670.1 | Barley | mitochondrion | 29.87 | 37.04 |
| Zm00001d000408_P001 | Maize | cytosol | 42.77 | 36.61 |
| KRH64574 | Soybean | cytosol | 12.42 | 24.61 |
| KRH36149 | Soybean | cytosol | 16.04 | 24.34 |
| KRH15905 | Soybean | cytosol | 13.99 | 23.99 |
| KRH50979 | Soybean | cytosol | 13.21 | 23.93 |
| KRG90608 | Soybean | cytosol | 15.41 | 23.45 |
| KRH53355 | Soybean | cytosol | 13.68 | 23.39 |
| KRH18090 | Soybean | cytosol | 13.68 | 23.2 |
| KRH20947 | Soybean | cytosol, nucleus, peroxisome | 22.01 | 23.06 |
| KRH11333 | Soybean | cytosol | 14.15 | 23.02 |
| KRH38032 | Soybean | cytosol | 13.68 | 23.02 |
| KRH15408 | Soybean | plastid | 19.81 | 22.95 |
| KRH02152 | Soybean | cytosol | 20.75 | 22.6 |
| KRH16153 | Soybean | cytosol | 8.81 | 22.58 |
| KRH47976 | Soybean | cytosol | 13.68 | 22.42 |
| KRH04530 | Soybean | cytosol | 18.87 | 22.26 |
| KRG96764 | Soybean | cytosol | 22.01 | 21.84 |
| KRH52037 | Soybean | cytosol | 13.68 | 21.53 |
| KRH68483 | Soybean | cytosol | 21.7 | 21.53 |
| KRH05631 | Soybean | plastid | 19.03 | 21.49 |
| KRH57971 | Soybean | cytosol | 18.55 | 21.11 |
| KRH77049 | Soybean | cytosol | 16.82 | 20.5 |
| KRH28425 | Soybean | cytosol | 16.82 | 20.34 |
| KRH72766 | Soybean | cytosol | 16.98 | 20.07 |
| KRH17127 | Soybean | cytosol | 20.13 | 19.63 |
| KRH76059 | Soybean | cytosol, nucleus, peroxisome | 20.6 | 19.52 |
| KRH65525 | Soybean | cytosol, peroxisome, plastid | 20.75 | 18.64 |
| KRH61346 | Soybean | cytosol | 12.58 | 11.46 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100805418 | MapMan:11.5.2.6 | MapMan:19.2.2.8.1.4.2 | Gene3D:3.80.10.10 | EMBL:ACUP02002188 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | EnsemblPlantsGene:GLYMA_04G066900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| UniProt:I1JUC8 | InterPro:IPR001611 | InterPro:IPR001810 | InterPro:IPR032675 | EnsemblPlants:KRH61771 | ProteinID:KRH61771 |
| ProteinID:KRH61771.1 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF00646 | PFAM:PF13516 |
| PFscan:PS50181 | PANTHER:PTHR44327 | PANTHER:PTHR44327:SF1 | SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI000233A7E9 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:5591410..5594952
Molecular Weight (calculated)
67888.5 Da
IEP (calculated)
7.342
GRAVY (calculated)
0.164
Length
636 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKVFSFTGN DDFYHGGPIY PNPKEPCLFL SLGRQVDVYL PLQKRSRFSV PFDISGEWFE QKPKTSIESL PDECLFEILR RLPAGQDRSV CASVSKRWLM
101: LLSSICKNET YSNESTGNEN QEISDEGYLS RSLEGKKATD VRLAAIAIGT ASRGGLGKLT IRGCNSDRGV TSVGLKAIAH GCPSLKVCSL WDVATVDDEG
201: LIEIASGCHR LEKLDLCKCP NISDKTLIAV AKNCPKLAEL SIESCPNIGN EGLQAIGKCP NLRSISIKDC SGVGDQGVAG VLSSASFALT KVKLESLNVS
301: DLSLAVIGHY GIAVTDLVLS CLPNVSEKGF WVMGNGHGLQ KLTSITIDCC RGVTDVGLEA IGRGCPNVQN FKLRKCAFLS DKGLVSFARA APSVESLQLQ
401: ECHRITQIGL FGVFFNCGAK LKVLTLISCY GIKDLNMELP AISPSESIWS LTIRDCPGFG DANLALLGKL CPRIQHVELS GLQGVTDAGF LPLLESSEAG
501: LVKVNLSGCV NLTDRVVLSM VNSHGWTLEV LSLDGCKRVS DASLMAIAGS CPVLADLDVS RCAITDTGIA ALARGKQFNL EVLSLAGCAL VSDKSVPALK
601: KLGRSLAGLN IKLCNAISSR SVDKLLGHLC MCDILY
101: LLSSICKNET YSNESTGNEN QEISDEGYLS RSLEGKKATD VRLAAIAIGT ASRGGLGKLT IRGCNSDRGV TSVGLKAIAH GCPSLKVCSL WDVATVDDEG
201: LIEIASGCHR LEKLDLCKCP NISDKTLIAV AKNCPKLAEL SIESCPNIGN EGLQAIGKCP NLRSISIKDC SGVGDQGVAG VLSSASFALT KVKLESLNVS
301: DLSLAVIGHY GIAVTDLVLS CLPNVSEKGF WVMGNGHGLQ KLTSITIDCC RGVTDVGLEA IGRGCPNVQN FKLRKCAFLS DKGLVSFARA APSVESLQLQ
401: ECHRITQIGL FGVFFNCGAK LKVLTLISCY GIKDLNMELP AISPSESIWS LTIRDCPGFG DANLALLGKL CPRIQHVELS GLQGVTDAGF LPLLESSEAG
501: LVKVNLSGCV NLTDRVVLSM VNSHGWTLEV LSLDGCKRVS DASLMAIAGS CPVLADLDVS RCAITDTGIA ALARGKQFNL EVLSLAGCAL VSDKSVPALK
601: KLGRSLAGLN IKLCNAISSR SVDKLLGHLC MCDILY
001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
Arabidopsis Description
EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.